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This orthogroup contains 778 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 778 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 631 / 778 | 81.1% | 94.9% of 665 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 653 / 778 | 83.9% | 97.9% of 667 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 638 / 778 | 82.0% | 95.7% of 667 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 635 / 778 | 81.6% | 95.2% of 667 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 631 / 778 | 81.1% | 94.6% of 667 | ≥80% support |
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 618 / 778 | 79.4% | 93.2% of 663 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 611 / 778 | 78.5% | 91.9% of 665 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 618 / 778 | 79.4% | 92.7% of 667 | ≥50% support |
| GO | GO:0007276 Biological Process | gamete generation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 608 / 778 | 78.2% | 91.2% of 667 | ≥50% support |
| GO | GO:0043186 Cellular Component | P granule | 429 / 778 | 55.1% | 64.3% of 667 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G020590 | XP_028404644.1 | ATP-dependent RNA helicase DDX4-like [Dendronephthya gigantea] | Q5W5U4 Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus OX=99 | JBrowse |
| Paragorgia papillata | Ppa0G303540 | XP_028401839.1 | LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X-like [Dendronephthya gigantea] | O15523 ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN= | JBrowse |
| Paragorgia papillata | Ppa0G384990 | XP_028403599.1 | ATP-dependent RNA helicase DDX4-like isoform X2 [Dendronephthya gigantea] | Q3MSQ8 Probable ATP-dependent RNA helicase DDX4 OS=Pelophylax lesso | JBrowse |
