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This orthogroup contains 463 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 463 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21725 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 | 381 / 463 | 82.3% | 98.7% of 386 | ≥80% support |
| Pfam | PF13764 | E3_UbLigase_R4 — E3 ubiquitin-protein ligase UBR4 | 258 / 463 | 55.7% | 70.7% of 365 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G076440 | CAB3995922.1 | E3 ubiquitin- ligase UBR4 [Paramuricea clavata] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
| Paragorgia papillata | Ppa0G355480 | XP_028410936.1 | E3 ubiquitin-protein ligase UBR4-like [Dendronephthya gigantea] | Q5T4S7 E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Paragorgia papillata | Ppa0G356370 | XP_028410936.1 | E3 ubiquitin-protein ligase UBR4-like [Dendronephthya gigantea] | Q29L39 Protein purity of essence OS=Drosophila pseudoobscura pseudo | JBrowse |
| Paragorgia papillata | Ppa0G371520 | CAB3995920.1 | E3 ubiquitin- ligase UBR4 [Paramuricea clavata] | – | JBrowse |
| Paragorgia papillata | Ppa0G371530 | CAB3995922.1 | E3 ubiquitin- ligase UBR4 [Paramuricea clavata] | Q5T4S7 E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Paragorgia papillata | Ppa0G371540 | CAB3995922.1 | E3 ubiquitin- ligase UBR4 [Paramuricea clavata] | A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN | JBrowse |
| Paragorgia papillata | Ppa0G371560 | CAB3993112.1 | E3 ubiquitin- ligase UBR4, partial [Paramuricea clavata] | Q5T4S7 E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Paragorgia papillata | Ppa0G371570 | CAB3995920.1 | E3 ubiquitin- ligase UBR4 [Paramuricea clavata] | – | JBrowse |
