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This orthogroup contains 318 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 318 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00415 | RCC1 | 229 / 318 | 72.0% | 79.8% of 287 | ≥50% support |
| Pfam | PF00632 | HECT | 228 / 318 | 71.7% | 79.4% of 287 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 234 / 318 | 73.6% | 95.9% of 244 | ≥50% support |
| KEGG | K10615 | HERC4 — Ubiquitin system | 175 / 318 | 55.0% | 95.6% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G247410 | XP_028404345.1 | probable E3 ubiquitin-protein ligase HERC4 [Dendronephthya gigantea] | Q5PQN1 Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegi | JBrowse |
