← Back to the gene family browser
This orthogroup contains 294 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 294 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10288 | KH DOMAIN CONTAINING RNA BINDING PROTEIN | 260 / 294 | 88.4% | 99.6% of 261 | ≥80% support |
| Pfam | PF00013 | KH_1 — KH domain | 263 / 294 | 89.5% | 100.0% of 263 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 264 / 294 | 89.8% | 100.0% of 264 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 261 / 294 | 88.8% | 98.9% of 264 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 239 / 294 | 81.3% | 90.5% of 264 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 239 / 294 | 81.3% | 90.5% of 264 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 239 / 294 | 81.3% | 90.5% of 264 | ≥80% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 239 / 294 | 81.3% | 90.5% of 264 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 228 / 294 | 77.6% | 86.4% of 264 | ≥50% support |
| GO | GO:0003730 Molecular Function | mRNA 3'-UTR binding | 227 / 294 | 77.2% | 86.0% of 264 | ≥50% support |
| GO | GO:0007399 Biological Process | nervous system development | 227 / 294 | 77.2% | 86.0% of 264 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G295270 | XP_046845726.1 | insulin-like growth factor 2 mRNA-binding protein 2 isoform X1 [Xenia sp. Carnegie-2017] | Q08CK7 Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio | JBrowse |
