← Back to the gene family browser
This orthogroup contains 275 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 275 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13405 | NUCLEAR PORE COMPLEX PROTEIN NUP133 | 229 / 275 | 83.3% | 99.1% of 231 | ≥80% support |
| GO | GO:0000972 Biological Process | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 229 / 275 | 83.3% | 96.2% of 238 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 229 / 275 | 83.3% | 96.2% of 238 | ≥80% support |
| GO | GO:0016973 Biological Process | poly(A)+ mRNA export from nucleus | 229 / 275 | 83.3% | 96.2% of 238 | ≥80% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 229 / 275 | 83.3% | 96.2% of 238 | ≥80% support |
| GO | GO:0031080 Cellular Component | nuclear pore outer ring | 229 / 275 | 83.3% | 96.2% of 238 | ≥80% support |
| Pfam | PF03177 | Nucleoporin_C — Non-repetitive/WGA-negative nucleoporin C-terminal | 174 / 275 | 63.3% | 86.6% of 201 | ≥50% support |
| Pfam | PF08801 | Nucleoporin_N — Nup133 N terminal like | 143 / 275 | 52.0% | 71.1% of 201 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 194 / 275 | 70.6% | 81.5% of 238 | ≥50% support |
| KEGG | K14300 | NUP133 — Chromosome and associated proteins | 145 / 275 | 52.7% | 96.7% of 150 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G165140 | CAB4015811.1 | nuclear pore complex Nup133-like, partial [Paramuricea clavata] | Q8R0G9 Nuclear pore complex protein Nup133 OS=Mus musculus OX=10090 | JBrowse |
