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This orthogroup contains 249 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 249 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23193 | NUCLEAR PORE COMPLEX PROTEIN NUP | 177 / 249 | 71.1% | 99.4% of 178 | ≥50% support |
| Pfam | PF00641 | zf-RanBP — Zn-finger in Ran binding protein and others | 173 / 249 | 69.5% | 93.5% of 185 | ≥50% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 177 / 249 | 71.1% | 100.0% of 177 | ≥50% support |
| GO | GO:0006405 Biological Process | RNA export from nucleus | 177 / 249 | 71.1% | 100.0% of 177 | ≥50% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 177 / 249 | 71.1% | 100.0% of 177 | ≥50% support |
| GO | GO:0008139 Molecular Function | nuclear localization sequence binding | 177 / 249 | 71.1% | 100.0% of 177 | ≥50% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 177 / 249 | 71.1% | 100.0% of 177 | ≥50% support |
| KEGG | K14296 | NUP153 — Messenger RNA biogenesis | 159 / 249 | 63.9% | 97.6% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G252210 | CAB4003308.1 | Nuclear pore complex Nup153 [Paramuricea clavata] | Q640Z6 Nuclear pore complex protein Nup153 OS=Xenopus laevis OX=835 | JBrowse |
