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This orthogroup contains 237 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 237 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12272 | DEADENYLATION COMPLEX SUBUNIT PAN3 | 198 / 237 | 83.5% | 100.0% of 198 | ≥80% support |
| GO | GO:0000289 Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| GO | GO:0000932 Cellular Component | P-body | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| GO | GO:0006397 Biological Process | mRNA processing | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| GO | GO:0008143 Molecular Function | poly(A) binding | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| GO | GO:0031251 Cellular Component | PAN complex | 198 / 237 | 83.5% | 96.1% of 206 | ≥80% support |
| Pfam | PF18101 | Pan3_PK — Pan3 Pseudokinase domain | 180 / 237 | 76.0% | 90.5% of 199 | ≥50% support |
| Pfam | PF00642 | zf-CCCH — Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 154 / 237 | 65.0% | 77.4% of 199 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 159 / 237 | 67.1% | 77.2% of 206 | ≥50% support |
| GO | GO:0004672 Molecular Function | protein kinase activity | 123 / 237 | 51.9% | 59.7% of 206 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 123 / 237 | 51.9% | 59.7% of 206 | ≥50% support |
| GO | GO:0006468 Biological Process | protein phosphorylation | 123 / 237 | 51.9% | 59.7% of 206 | ≥50% support |
| KEGG | K12572 | PAN3 — Messenger RNA biogenesis | 161 / 237 | 67.9% | 98.8% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G261680 | XP_028405015.1 | PAN2-PAN3 deadenylation complex subunit pan3-like [Dendronephthya gigantea] | Q640Q5 PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus | JBrowse |
