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This orthogroup contains 237 genes from 122 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 237 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13318 | UNCHARACTERIZED | 137 / 237 | 57.8% | 78.3% of 175 | ≥50% support |
| Pfam | PF12937 | F-box-like | 152 / 237 | 64.1% | 90.5% of 168 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 168 / 237 | 70.9% | 87.5% of 192 | ≥50% support |
| GO | GO:0019005 Cellular Component | SCF ubiquitin ligase complex | 139 / 237 | 58.7% | 72.4% of 192 | ≥50% support |
| GO | GO:0031146 Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 139 / 237 | 58.7% | 72.4% of 192 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G296220 | XP_046847004.1 | F-box/LRR-repeat protein 4-like [Xenia sp. Carnegie-2017] | Q8BH70 F-box/LRR-repeat protein 4 OS=Mus musculus OX=10090 GN=Fbxl4 | JBrowse |
