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This orthogroup contains 236 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 236 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12749 | EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| Pfam | PF03834 | Rad10 | 192 / 236 | 81.4% | 95.1% of 202 | ≥80% support |
| GO | GO:0000110 Cellular Component | nucleotide-excision repair factor 1 complex | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0003684 Molecular Function | damaged DNA binding | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0003697 Molecular Function | single-stranded DNA binding | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0006281 Biological Process | DNA repair | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0006312 Biological Process | mitotic recombination | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0070522 Cellular Component | ERCC4-ERCC1 complex | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| GO | GO:0070914 Biological Process | UV-damage excision repair | 201 / 236 | 85.2% | 99.5% of 202 | ≥80% support |
| Pfam | PF14520 | HHH_5 — Helix-hairpin-helix domain | 146 / 236 | 61.9% | 72.3% of 202 | ≥50% support |
| KEGG | K10849 | ERCC1 — DNA repair and recombination proteins | 149 / 236 | 63.1% | 98.7% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G357040 | XP_020609277.1 | DNA excision repair protein ERCC-1-like isoform X1 [Orbicella faveolata] | P07903 DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 | JBrowse |
