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This orthogroup contains 235 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 235 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00687 | Ribosomal_L1 — Ribosomal protein L1p/L10e family | 199 / 235 | 84.7% | 100.0% of 199 | ≥80% support |
| PANTHER | PTHR23105 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER | 138 / 235 | 58.7% | 98.6% of 140 | ≥50% support |
| GO | GO:0000470 Biological Process | maturation of LSU-rRNA | 138 / 235 | 58.7% | 98.6% of 140 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 138 / 235 | 58.7% | 98.6% of 140 | ≥50% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 138 / 235 | 58.7% | 98.6% of 140 | ≥50% support |
| GO | GO:0030686 Cellular Component | 90S preribosome | 138 / 235 | 58.7% | 98.6% of 140 | ≥50% support |
| KEGG | K14775 | UTP30, RSL1D1 — Ribosome biogenesis | 164 / 235 | 69.8% | 97.6% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G290110 | CAB3989301.1 | ribosomal L1 [Paramuricea clavata] | O76021 Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX= | JBrowse |
