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This orthogroup contains 231 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 231 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 194 / 231 | 84.0% | 100.0% of 194 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 195 / 231 | 84.4% | 100.0% of 195 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 195 / 231 | 84.4% | 100.0% of 195 | ≥80% support |
| PANTHER | PTHR48025 | OS02G0815200 PROTEIN | 172 / 231 | 74.5% | 90.5% of 190 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 178 / 231 | 77.1% | 91.3% of 195 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 173 / 231 | 74.9% | 88.7% of 195 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G349410 | CAB4035575.1 | Ribonucleo PTB-binding 2, partial [Paramuricea clavata] | Q9CW46 Ribonucleoprotein PTB-binding 1 OS=Mus musculus OX=10090 GN= | JBrowse |
