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This orthogroup contains 227 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 227 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 191 / 227 | 84.1% | 99.0% of 193 | ≥80% support |
| Pfam | PF00270 | DEAD | 188 / 227 | 82.8% | 97.4% of 193 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 188 / 227 | 82.8% | 97.4% of 193 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 188 / 227 | 82.8% | 100.0% of 188 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 188 / 227 | 82.8% | 100.0% of 188 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 160 / 227 | 70.5% | 85.1% of 188 | ≥50% support |
| KEGG | K14810 | DDX56, DBP9 — Ribosome biogenesis | 175 / 227 | 77.1% | 100.0% of 175 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G128490 | XP_028391173.1 | probable ATP-dependent RNA helicase DDX56 [Dendronephthya gigantea] | Q3SZ40 Probable ATP-dependent RNA helicase DDX56 OS=Bos taurus OX=9 | JBrowse |
