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This orthogroup contains 223 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 223 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23236 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 188 / 223 | 84.3% | 99.0% of 190 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 189 / 223 | 84.8% | 99.5% of 190 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 189 / 223 | 84.8% | 99.5% of 190 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 189 / 223 | 84.8% | 99.5% of 190 | ≥80% support |
| GO | GO:0008143 Molecular Function | poly(A) binding | 187 / 223 | 83.9% | 98.4% of 190 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 184 / 223 | 82.5% | 96.8% of 190 | ≥80% support |
| KEGG | K14396 | PABPN1, PABP2 — Messenger RNA biogenesis | 184 / 223 | 82.5% | 98.9% of 186 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G375840 | XP_028392410.1 | polyadenylate-binding protein 2-like [Dendronephthya gigantea] | Q9DDY9 Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 | JBrowse |
