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This orthogroup contains 220 genes from 131 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 220 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR32235 | NON-HOMOLOGOUS END-JOINING FACTOR 1 | 179 / 220 | 81.4% | 99.4% of 180 | ≥80% support |
| GO | GO:0006303 Biological Process | double-strand break repair via nonhomologous end joining | 179 / 220 | 81.4% | 98.4% of 182 | ≥80% support |
| GO | GO:0032807 Cellular Component | DNA ligase IV complex | 179 / 220 | 81.4% | 98.4% of 182 | ≥80% support |
| GO | GO:0045027 Molecular Function | DNA end binding | 179 / 220 | 81.4% | 98.4% of 182 | ≥80% support |
| Pfam | PF09302 | XLF | 171 / 220 | 77.7% | 99.4% of 172 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 172 / 220 | 78.2% | 94.5% of 182 | ≥50% support |
| GO | GO:0006302 Biological Process | double-strand break repair | 171 / 220 | 77.7% | 94.0% of 182 | ≥50% support |
| KEGG | K10980 | NHEJ1, XLF — DNA repair and recombination proteins | 112 / 220 | 50.9% | 99.1% of 113 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G291770 | XP_046847239.1 | LOW QUALITY PROTEIN: non-homologous end-joining factor 1-like [Xenia sp. Carnegie-2017] | A0A1L8ENT6 Non-homologous end-joining factor 1 OS=Xenopus laevis OX=835 | JBrowse |
