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This orthogroup contains 212 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 212 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR44006 | U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN | 185 / 212 | 87.3% | 100.0% of 185 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 185 / 212 | 87.3% | 100.0% of 185 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 186 / 212 | 87.7% | 100.0% of 186 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 185 / 212 | 87.3% | 99.5% of 186 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 185 / 212 | 87.3% | 99.5% of 186 | ≥80% support |
| KEGG | K12857 | SNRNP40, PRP8BP — Spliceosome | 160 / 212 | 75.5% | 97.6% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G006680 | XP_028401043.1 | U5 small nuclear ribonucleoprotein 40 kDa protein-like [Dendronephthya gigantea] | Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sa | JBrowse |
