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This orthogroup contains 197 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 197 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13503 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B | 178 / 197 | 90.4% | 99.4% of 179 | ≥80% support |
| Pfam | PF06209 | COBRA1 | 173 / 197 | 87.8% | 100.0% of 173 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 179 / 197 | 90.9% | 100.0% of 179 | ≥80% support |
| GO | GO:0045892 Biological Process | negative regulation of DNA-templated transcription | 179 / 197 | 90.9% | 100.0% of 179 | ≥80% support |
| GO | GO:0032021 Cellular Component | NELF complex | 178 / 197 | 90.4% | 99.4% of 179 | ≥80% support |
| GO | GO:0034244 Biological Process | negative regulation of transcription elongation by RNA polymerase II | 178 / 197 | 90.4% | 99.4% of 179 | ≥80% support |
| KEGG | K15180 | COBRA1, NELFB — Transcription machinery | 141 / 197 | 71.6% | 97.2% of 145 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G157630 | CAB4000568.1 | Negative elongation factor B [Paramuricea clavata] | Q8C4Y3 Negative elongation factor B OS=Mus musculus OX=10090 GN=Nel | JBrowse |
