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This orthogroup contains 186 genes from 125 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 186 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11831 | 30S 40S RIBOSOMAL PROTEIN | 159 / 186 | 85.5% | 100.0% of 159 | ≥80% support |
| Pfam | PF01479 | S4 | 157 / 186 | 84.4% | 96.9% of 162 | ≥80% support |
| Pfam | PF00163 | Ribosomal_S4 — Ribosomal protein S4/S9 N-terminal domain | 153 / 186 | 82.3% | 94.4% of 162 | ≥80% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 161 / 186 | 86.6% | 99.4% of 162 | ≥80% support |
| GO | GO:0006364 Biological Process | rRNA processing | 159 / 186 | 85.5% | 98.2% of 162 | ≥80% support |
| GO | GO:0030515 Molecular Function | snoRNA binding | 159 / 186 | 85.5% | 98.2% of 162 | ≥80% support |
| GO | GO:0032040 Cellular Component | small-subunit processome | 159 / 186 | 85.5% | 98.2% of 162 | ≥80% support |
| GO | GO:0034457 Cellular Component | Mpp10 complex | 159 / 186 | 85.5% | 98.2% of 162 | ≥80% support |
| GO | GO:0042274 Biological Process | ribosomal small subunit biogenesis | 159 / 186 | 85.5% | 98.2% of 162 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 157 / 186 | 84.4% | 96.9% of 162 | ≥80% support |
| KEGG | K14560 | IMP3 — Ribosome biogenesis | 155 / 186 | 83.3% | 100.0% of 155 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G295430 | CAB4035279.1 | U3 small nucleolar ribonucleo IMP3-like [Paramuricea clavata] | Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP3 OS=Mus mus | JBrowse |
