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This orthogroup contains 186 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 186 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15002 | UNCHARACTERIZED | 157 / 186 | 84.4% | 100.0% of 157 | ≥80% support |
| Pfam | PF04031 | Las1 | 158 / 186 | 85.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0004519 Molecular Function | endonuclease activity | 158 / 186 | 85.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0006364 Biological Process | rRNA processing | 158 / 186 | 85.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0090730 Cellular Component | Las1 complex | 158 / 186 | 85.0% | 100.0% of 158 | ≥80% support |
| GO | GO:0000460 Biological Process | maturation of 5.8S rRNA | 157 / 186 | 84.4% | 99.4% of 158 | ≥80% support |
| GO | GO:0000470 Biological Process | maturation of LSU-rRNA | 157 / 186 | 84.4% | 99.4% of 158 | ≥80% support |
| GO | GO:0030687 Cellular Component | preribosome, large subunit precursor | 157 / 186 | 84.4% | 99.4% of 158 | ≥80% support |
| KEGG | K16912 | LAS1 — Ribosome biogenesis | 112 / 186 | 60.2% | 99.1% of 113 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G069200 | CAB3999720.1 | pre-rRNA-processing las1-like [Paramuricea clavata] | Q9Y4W2 Ribosomal biogenesis protein LAS1L OS=Homo sapiens OX=9606 G | JBrowse |
