← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 132 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 122 / 132 | 92.4% | 96.1% of 127 | ≥80% support |
| Pfam | PF03160 | Calx-beta | 119 / 132 | 90.2% | 93.7% of 127 | ≥80% support |
| Pfam | PF12947 | EGF_3 — EGF domain | 119 / 132 | 90.2% | 93.7% of 127 | ≥80% support |
| Pfam | PF00041 | fn3 — Fibronectin type III domain | 113 / 132 | 85.6% | 89.0% of 127 | ≥80% support |
| GO | GO:0007154 Biological Process | cell communication | 119 / 132 | 90.2% | 93.7% of 127 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 119 / 132 | 90.2% | 93.7% of 127 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 118 / 132 | 89.4% | 92.9% of 127 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 114 / 132 | 86.4% | 89.8% of 127 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G292220 | CAB4002392.1 | cartilage matrix, partial [Paramuricea clavata] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Paragorgia papillata | Ppa0G292230 | XP_028400095.1 | uncharacterized protein LOC114521039 isoform X38 [Dendronephthya gigantea] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
