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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Palythoa umbrosa | c0150.g014.t1 | XP_020629888.1 | heart- and neural crest derivatives-expressed protein 2-like [Orbicella faveolata] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Palythoa umbrosa | c0150.g015.t1 | XP_001632876.2 | heart- and neural crest derivatives-expressed protein 2 [Nematostella vectensis] | P61296 Heart- and neural crest derivatives-expressed protein 2 OS=H | JBrowse |
| Palythoa umbrosa | c0226.g007.t1 | XP_020617680.1 | T-cell acute lymphocytic leukemia protein 1-like [Orbicella faveolata] | P12980 Protein lyl-1 OS=Homo sapiens OX=9606 GN=LYL1 PE=1 SV=3 | JBrowse |
| Palythoa umbrosa | c0226.g008.t1 | XP_027041301.1 | protein atonal homolog 7-like [Pocillopora damicornis] | O93507 T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio | JBrowse |
| Palythoa umbrosa | c0226.g009.t1 | XP_031550006.1 | T-cell acute lymphocytic leukemia protein 1 homolog [Actinia tenebrosa] | O73823 T-cell acute lymphocytic leukemia protein 1 OS=Xenopus laevi | JBrowse |
| Palythoa umbrosa | c0226.g010.t1 | XP_027041311.1 | T-cell acute lymphocytic leukemia protein 1 homolog [Pocillopora damicornis] | Q16559 T-cell acute lymphocytic leukemia protein 2 OS=Homo sapiens | JBrowse |
| Palythoa umbrosa | c0733.g004.t1 | XP_020616252.1 | transcription factor 15-like [Orbicella faveolata] | P48987 Protein atonal OS=Drosophila melanogaster OX=7227 GN=ato PE= | JBrowse |
| Palythoa umbrosa | c0733.g005.t1 | XP_015770453.1 | PREDICTED: twist-related protein-like [Acropora digitifera] | P13903 Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE | JBrowse |
| Palythoa umbrosa | c0733.g009.t1 | XP_020892182.1 | transcription factor 15 [Exaiptasia diaphana] | P79782 Transcription factor 15 OS=Gallus gallus OX=9031 GN=TCF15 PE | JBrowse |
| Palythoa umbrosa | c0737.g012.t1 | XP_020622947.1 | protein atonal homolog 8-like [Orbicella faveolata] | D2CLZ9 Transcription factor atoh8 OS=Danio rerio OX=7955 GN=atoh8 P | JBrowse |
| Palythoa umbrosa | c0746.g010.t1 | XP_020892260.1 | basic helix-loop-helix transcription factor scleraxis [Exaiptasia diaphana] | Q96RJ6 Fer3-like protein OS=Homo sapiens OX=9606 GN=FERD3L PE=1 SV= | JBrowse |
| Palythoa umbrosa | c0989.g008.t1 | XP_027048318.1 | protein atonal homolog 7-A-like [Pocillopora damicornis] | – | JBrowse |
| Palythoa umbrosa | c1212.g008.t1 | XP_020629353.1 | helix-loop-helix protein 2-like [Orbicella faveolata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Palythoa umbrosa | c1456.g002.t1 | CAH3157073.1 | unnamed protein product [Porites evermanni] | Q20561 Helix-loop-helix protein 13 OS=Caenorhabditis elegans OX=623 | JBrowse |
| Palythoa umbrosa | c1456.g003.t1 | XP_020917318.1 | pancreas transcription factor 1 subunit alpha [Exaiptasia diaphana] | Q4ZHW1 Pancreas transcription factor 1 subunit alpha OS=Xenopus lae | JBrowse |
| Palythoa umbrosa | c1540.g002.t1 | XP_027048862.1 | achaete-scute homolog 1-like [Pocillopora damicornis] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Palythoa umbrosa | c1655.g001.t1 | XP_027048909.1 | achaete-scute homolog 3-like [Pocillopora damicornis] | M0QWB7 Achaete-scute homolog 5 OS=Mus musculus OX=10090 GN=Ascl5 PE | JBrowse |
| Palythoa umbrosa | c1655.g002.t1 | CAH3162509.1 | unnamed protein product [Pocillopora meandrina] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
