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Support counts the member genes carrying the term. % of genes is that count over all 63 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30273 | PERIPLASMIC SIGNAL SENSOR AND SIGMA FACTOR ACTIVATOR FECR-RELATED | 44 / 63 | 69.8% | 73.3% of 60 | ≥50% support |
| Pfam | PF04773 | FecR | 45 / 63 | 71.4% | 73.8% of 61 | ≥50% support |
| Pfam | PF16220 | DUF4880 | 37 / 63 | 58.7% | 60.7% of 61 | ≥50% support |
| GO | GO:0016989 Molecular Function | sigma factor antagonist activity | 44 / 63 | 69.8% | 71.0% of 62 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 33 / 63 | 52.4% | 53.2% of 62 | ≥50% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 32 / 63 | 50.8% | 51.6% of 62 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g16011.t1 | MBN2491439.1 | sigma-70 family RNA polymerase sigma factor [Planctomycetota bacterium] | H8F0N6 ECF RNA polymerase sigma factor SigE OS=Mycobacterium tuberc | JBrowse |
| Hydra oligactis | HOLI00001.G49560 | WP_175649532.1 | FecR family protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49567 | WP_175649536.1 | TonB-dependent receptor [Pseudomonas sp. Marseille-P9899] | Q6U607 Ferric aerobactin receptor OS=Klebsiella pneumoniae OX=573 G | JBrowse |
| Hydra oligactis | HOLI00001.G49610 | WP_042130427.1 | FecR domain-containing protein [Pseudomonas japonica] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49703 | WP_095155276.1 | FecR domain-containing protein [Pseudomonas sp. Irchel 3E13] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49704 | WP_264310229.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas putida] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G49706 | WP_110973438.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas huaxiensis] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G49735 | WP_042128576.1 | FecR domain-containing protein [Pseudomonas japonica] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G49860 | WP_279904111.1 | MULTISPECIES: FecR domain-containing protein [unclassified Pseudomonas] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G49896 | WP_095159684.1 | MULTISPECIES: FecR domain-containing protein [unclassified Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49897 | WP_095159684.1 | MULTISPECIES: FecR domain-containing protein [unclassified Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49898 | WP_095159685.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G49935 | WP_042128119.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas japonica] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50135 | WP_163940277.1 | FecR domain-containing protein [Pseudomonas brassicae] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G50148 | WP_095153386.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [unclassified Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50149 | WP_175650315.1 | FecR family protein [Pseudomonas sp. Marseille-P9899] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50254 | WP_095158486.1 | FecR domain-containing protein [Pseudomonas sp. Irchel 3E13] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G50255 | WP_175650371.1 | sigma-70 family RNA polymerase sigma factor [Pseudomonas sp. Marseille-P9899] | P23484 Ferric citrate uptake sigma factor FecI OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50760 | WP_262130022.1 | FecR domain-containing protein [Pseudomonas sp. 5P_5.1_Bac1] | P23485 Ferric citrate uptake sigma factor regulator FecR OS=Escheri | JBrowse |
| Hydra oligactis | HOLI00001.G50808 | WP_262155805.1 | MULTISPECIES: FecR domain-containing protein [unclassified Pseudomonas] | – | JBrowse |
