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Support counts the member genes carrying the term. % of genes is that count over all 10 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF03739 | LptF_LptG — Lipopolysaccharide export system permease LptF/LptG | 8 / 10 | 80.0% | 88.9% of 9 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 8 / 10 | 80.0% | 88.9% of 9 | ≥80% support |
| PANTHER | PTHR33529 | SLR0882 PROTEIN-RELATED | 6 / 10 | 60.0% | 100.0% of 6 | ≥50% support |
| GO | GO:0015920 Biological Process | lipopolysaccharide transport | 6 / 10 | 60.0% | 66.7% of 9 | ≥50% support |
| GO | GO:0043190 Cellular Component | ATP-binding cassette (ABC) transporter complex | 6 / 10 | 60.0% | 66.7% of 9 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold10.g226.t1 | none | – | JBrowse | |
| Hydra oligactis | HOLI00001.G53832 | WP_262128685.1 | MULTISPECIES: LPS export ABC transporter permease LptF [unclassified Pseudomonas] | P0AFA0 Lipopolysaccharide export system permease protein LptF OS=Es | JBrowse |
| Hydra oligactis | HOLI00655.G57002 | WP_105262828.1 | LPS export ABC transporter permease LptG [Rhodoferax sp. TS-BS-61-7] | A6UWT5 Sirohydrochlorin cobaltochelatase OS=Methanococcus aeolicus | JBrowse |
| Hydra oligactis | HOLI02858.G48357 | WP_208931881.1 | LPS export ABC transporter permease LptG [Rheinheimera sp. F8] | P45332 Lipopolysaccharide export system permease protein LptG OS=Ha | JBrowse |
| Hydra oligactis | HOLI02858.G48359 | WP_208931882.1 | LPS export ABC transporter permease LptF [Rheinheimera sp. F8] | – | JBrowse |
| Hydra oligactis | HOLI02858.G48360 | WP_208931882.1 | LPS export ABC transporter permease LptF [Rheinheimera sp. F8] | P45333 Lipopolysaccharide export system permease protein LptF OS=Ha | JBrowse |
| Hydra oligactis | HOLI03250.G1083 | WP_280192539.1 | LPS export ABC transporter permease LptF [Delftia sp. PS-11] | – | JBrowse |
| Hydra oligactis | HOLI03250.G1084 | WP_280192537.1 | CbiX/SirB N-terminal domain-containing protein [Delftia sp. PS-11] | – | JBrowse |
| Hydra viridissima | BRAKERKREP00000023820.1 | WP_003813765.1 | MULTISPECIES: LPS export ABC transporter permease LptF [Bordetella] | – | JBrowse |
| Hydra viridissima | g20442.t1.1 | none | – | JBrowse |
