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Support counts the member genes carrying the term. % of genes is that count over all 5 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF03466 | LysR_substrate — LysR substrate binding domain | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| Pfam | PF00126 | HTH_1 — Bacterial regulatory helix-turn-helix protein, lysR family | 4 / 5 | 80.0% | 80.0% of 5 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 4 / 5 | 80.0% | 80.0% of 5 | ≥80% support |
| PANTHER | PTHR30579 | TRANSCRIPTIONAL REGULATOR | 3 / 5 | 60.0% | 60.0% of 5 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Calvadosia cruxmelitensis | g807.t1 | XP_004207308.2 | syntaxin-binding protein 1 [Hydra vulgaris] | Q6R748 Syntaxin-binding protein 1 OS=Gallus gallus OX=9031 GN=STXBP | JBrowse |
| Cassiopea xamachana | Cxam_g1162.t1 | WP_170398552.1 | LysR family transcriptional regulator [Ruegeria arenilitoris] | – | JBrowse |
| Cassiopea xamachana | Cxam_g1175.t1 | WP_170324814.1 | LysR family transcriptional regulator [Ruegeria arenilitoris] | O69772 HTH-type transcriptional activator AmpR OS=Providencia stuar | JBrowse |
| Hydra oligactis | HOLI00001.G52840 | WP_110969859.1 | MULTISPECIES: LysR family transcriptional regulator [Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53461 | WP_110971017.1 | LysR family transcriptional regulator [Pseudomonas huaxiensis] | A7ZTW7 HTH-type transcriptional regulator HdfR OS=Escherichia coli | JBrowse |
