← Back to the gene family browser
This orthogroup contains 5 genes from 2 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 5 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24023 | COLLAGEN ALPHA | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0005615 Cellular Component | extracellular space | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0031012 Cellular Component | extracellular matrix | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| Pfam | PF01391 | Collagen | 4 / 5 | 80.0% | 100.0% of 4 | ≥80% support |
| GO | GO:0030020 Molecular Function | extracellular matrix structural constituent conferring tensile strength | 4 / 5 | 80.0% | 80.0% of 5 | ≥80% support |
| GO | GO:0030198 Biological Process | extracellular matrix organization | 4 / 5 | 80.0% | 80.0% of 5 | ≥80% support |
| GO | GO:0062023 Cellular Component | collagen-containing extracellular matrix | 4 / 5 | 80.0% | 80.0% of 5 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Genome browser |
|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000036777.1 | none | JBrowse | |
| Eunicella cavolini | ENSLDHP00000036781.1 | none | JBrowse | |
| Eunicella cavolini | ENSLDHP00000036787.1 | none | JBrowse | |
| Eunicella cavolini | ENSLDHP00000043770.1 | none | JBrowse | |
| Eunicella verrucosa | ENSNOVP00005008435.1 | none | JBrowse |
