← Back to the gene family browser
This orthogroup contains 4 genes from 2 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 4 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00440 | TetR_N — Bacterial regulatory proteins, tetR family | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| GO | GO:0003677 Molecular Function | DNA binding | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| PANTHER | PTHR30055 | HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR | 2 / 4 | 50.0% | 50.0% of 4 | ≥50% support |
| PANTHER | PTHR47506 | TRANSCRIPTIONAL REGULATORY PROTEIN | 2 / 4 | 50.0% | 50.0% of 4 | ≥50% support |
| GO | GO:0000976 Molecular Function | transcription cis-regulatory region binding | 2 / 4 | 50.0% | 50.0% of 4 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2 / 4 | 50.0% | 50.0% of 4 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 2 / 4 | 50.0% | 50.0% of 4 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g13811.t1 | MCA9281204.1 | TetR/AcrR family transcriptional regulator [Phycisphaerales bacterium] | – | JBrowse |
| Cassiopea xamachana | Cxam_g20046.t1 | WP_206293112.1 | TetR/AcrR family transcriptional regulator [Humisphaera borealis] | A0R4Z6 HTH-type transcriptional repressor KstR2 OS=Mycolicibacteriu | JBrowse |
| Cassiopea xamachana | Cxam_g2011.t1 | WP_170400648.1 | TetR family transcriptional regulator [Ruegeria arenilitoris] | – | JBrowse |
| Hydra oligactis | HOLI00622.G30996 | WP_208931450.1 | TetR/AcrR family transcriptional regulator [Rheinheimera sp. F8] | – | JBrowse |
