Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0013188.1 MHONG_EVM0013188.1 8 5 5.3 719 0.000289436 gene=EVM0013188
KII68458.1 TKITA_KII68458.1 8 5 9.6 519 0.000289436 hypothetical protein RF11_10816 [Thelohanellus kitauei]
KII68641.1 TKITA_KII68641.1 8 5 16.6 301 0.000289436 hypothetical protein RF11_14577 [Thelohanellus kitauei]
KII74788.1 TKITA_KII74788.1 8 5 33.8 148 0.000289436 hypothetical protein RF11_06581 [Thelohanellus kitauei]
EVM0000880.2 MHONG_EVM0000880.2 7 5 11.7 386 0.000289436 gene=EVM0000880
EVM0003550.1 MHONG_EVM0003550.1 7 5 12.5 463 0.000289436 gene=EVM0003550
EVM0003945.1 MHONG_EVM0003945.1 7 5 12.1 306 0.000289436 gene=EVM0003945
EVM0008159.1 MHONG_EVM0008159.1 7 5 36.2 177 0.000289436 gene=EVM0008159
EVM0009919.1 MHONG_EVM0009919.1 7 5 29.4 160 0.000289436 gene=EVM0009919
EVM0012961.1 MHONG_EVM0012961.1 7 5 8.4 830 0.000289436 gene=EVM0012961
EVM0015124.1 MHONG_EVM0015124.1 7 5 26.4 242 0.000289436 gene=EVM0015124
EVM0015377.1 MHONG_EVM0015377.1 7 5 19.1 304 0.000289436 gene=EVM0015377
KII67005.1 TKITA_KII67005.1 7 5 43.5 124 0.000289436 hypothetical protein RF11_07544 [Thelohanellus kitauei]
KII73389.1 TKITA_KII73389.1 7 5 34.7 150 0.000289436 Hexokinase [Thelohanellus kitauei]
EVM0000082.1 MHONG_EVM0000082.1 6 5 24.8 202 0.000289436 gene=EVM0000082
EVM0000110.1 MHONG_EVM0000110.1 6 5 7.8 782 0.000289436 gene=EVM0000110
EVM0001431.1 MHONG_EVM0001431.1 6 5 6 888 0.000289436 gene=EVM0001431
EVM0002653.1 MHONG_EVM0002653.1 6 5 3.3 1687 0.000289436 gene=EVM0002653
EVM0004673.1 MHONG_EVM0004673.1 6 5 27.1 133 0.000289436 gene=EVM0004673
EVM0005277.1 MHONG_EVM0005277.1 6 5 17.5 286 0.000289436 gene=EVM0005277
EVM0005697.1 MHONG_EVM0005697.1 6 5 13.7 527 0.000289436 gene=EVM0005697
EVM0008473.2 MHONG_EVM0008473.2 6 5 14.9 368 0.000289436 gene=EVM0008473
EVM0009021.1 MHONG_EVM0009021.1 6 5 4.6 1179 0.000289436 gene=EVM0009021
EVM0011744.1 MHONG_EVM0011744.1 6 5 44.6 148 0.000289436 gene=EVM0011744
EVM0012700.1 MHONG_EVM0012700.1 6 5 18.7 273 0.000289436 gene=EVM0012700
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1 7 8 9 10 11 12 13 56 Next › Last » of 56 pages
TOP