Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0013814.1 MHONG_EVM0013814.1 6 5 9.6 509 0.000289436 gene=EVM0013814
EVM0014967.1 MHONG_EVM0014967.1 6 5 26.4 265 0.000289436 gene=EVM0014967
KII70050.1 TKITA_KII70050.1 6 5 32.3 155 0.000289436 Nanos 1 [Thelohanellus kitauei]
EVM0000187.1 MHONG_EVM0000187.1 5 5 7 616 0.000289436 gene=EVM0000187
EVM0000251.1 MHONG_EVM0000251.1 5 5 22.5 253 0.000289436 gene=EVM0000251
EVM0000406.1 MHONG_EVM0000406.1 5 5 17.5 371 0.000289436 gene=EVM0000406
EVM0000441.1 MHONG_EVM0000441.1 5 5 17.7 339 0.000289436 gene=EVM0000441
EVM0003393.1 MHONG_EVM0003393.1 5 5 16.3 300 0.000289436 gene=EVM0003393
EVM0003787.1 MHONG_EVM0003787.1 5 5 11.8 611 0.000289436 gene=EVM0003787
EVM0004711.1 MHONG_EVM0004711.1 5 5 5.4 900 0.000289436 gene=EVM0004711
EVM0005664.1 MHONG_EVM0005664.1 5 5 10.3 349 0.000289436 gene=EVM0005664
EVM0006310.1 MHONG_EVM0006310.1 5 5 16.5 387 0.000289436 gene=EVM0006310
EVM0006430.1 MHONG_EVM0006430.1 5 5 11.9 520 0.000289436 gene=EVM0006430
EVM0007546.1 MHONG_EVM0007546.1 5 5 8.8 535 0.000289436 gene=EVM0007546
EVM0008190.1 MHONG_EVM0008190.1 5 5 15.6 340 0.000289436 gene=EVM0008190
EVM0008999.1 MHONG_EVM0008999.1 5 5 8.2 638 0.000289436 gene=EVM0008999
EVM0009167.1 MHONG_EVM0009167.1 5 5 13.9 423 0.000289436 gene=EVM0009167
EVM0009557.1 MHONG_EVM0009557.1 5 5 17.1 409 0.000289436 gene=EVM0009557
EVM0012109.1 MHONG_EVM0012109.1 5 5 13.5 436 0.000289436 gene=EVM0012109
EVM0012983.1 MHONG_EVM0012983.1 5 5 11.3 530 0.000289436 gene=EVM0012983
EVM0013588.1 MHONG_EVM0013588.1 5 5 16.4 444 0.000289436 gene=EVM0013588
KII60760.1 TKITA_KII60760.1 5 5 14.5 379 0.000289436 Vacuolar protein sorting-associated protein 33B [Thelohanellus kitauei]
KII67189.1 TKITA_KII67189.1 5 5 17.5 338 0.000289436 Pyrimidine-specific ribonucleoside hydrolase RihA [Thelohanellus kitauei]
KII67683.1 TKITA_KII67683.1 5 5 22.6 199 0.000289436 hypothetical protein RF11_07309 [Thelohanellus kitauei]
KII70722.1 TKITA_KII70722.1 5 5 20.1 354 0.000289436 hypothetical protein RF11_09058 [Thelohanellus kitauei]
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1… 8 9 10 11 12 13 14 … 56 Next › Last » of 56 pages
TOP