Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0003573.1 MHONG_EVM0003573.1 4 4 11.1 389 0.000289436 gene=EVM0003573
EVM0003828.1 MHONG_EVM0003828.1 4 4 10.7 261 0.000289436 gene=EVM0003828
EVM0004013.1 MHONG_EVM0004013.1 4 4 7 681 0.000289436 gene=EVM0004013
EVM0004193.1 MHONG_EVM0004193.1 4 4 19.2 344 0.000289436 gene=EVM0004193
EVM0004206.2 MHONG_EVM0004206.2 4 4 7.2 697 0.000289436 gene=EVM0004206
EVM0004657.1 MHONG_EVM0004657.1 4 4 16.3 337 0.000289436 gene=EVM0004657
EVM0004875.1 MHONG_EVM0004875.1 4 4 28.2 170 0.000289436 gene=EVM0004875
EVM0004947.1 MHONG_EVM0004947.1 4 4 38.9 144 0.000289436 gene=EVM0004947
EVM0005383.1 MHONG_EVM0005383.1 4 4 3.2 1546 0.000289436 gene=EVM0005383
EVM0005839.1 MHONG_EVM0005839.1 4 4 15.2 302 0.000289436 gene=EVM0005839
EVM0007201.1 MHONG_EVM0007201.1 4 4 3.2 1373 0.000289436 gene=EVM0007201
EVM0008077.1 MHONG_EVM0008077.1 4 4 14.1 319 0.000289436 gene=EVM0008077
EVM0008347.1 MHONG_EVM0008347.1 4 4 17.9 273 0.000289436 gene=EVM0008347
EVM0008828.1 MHONG_EVM0008828.1 4 4 29.2 161 0.000289436 gene=EVM0008828
EVM0008917.1 MHONG_EVM0008917.1 4 4 35.2 145 0.000289436 gene=EVM0008917
EVM0009754.1 MHONG_EVM0009754.1 4 4 15.3 300 0.000289436 gene=EVM0009754
EVM0009767.1 MHONG_EVM0009767.1 4 4 12.3 432 0.000289436 gene=EVM0009767
EVM0010269.1 MHONG_EVM0010269.1 4 4 12.1 330 0.000289436 gene=EVM0010269
EVM0010638.1 MHONG_EVM0010638.1 4 4 3.7 1199 0.000289436 gene=EVM0010638
EVM0010706.1 MHONG_EVM0010706.1 4 4 8.9 537 0.000289436 gene=EVM0010706
EVM0011331.1 MHONG_EVM0011331.1 4 4 7.4 555 0.000289436 gene=EVM0011331
EVM0011474.1 MHONG_EVM0011474.1 4 4 20.4 206 0.000289436 gene=EVM0011474
EVM0011595.1 MHONG_EVM0011595.1 4 4 4 1063 0.000289436 gene=EVM0011595
EVM0011778.1 MHONG_EVM0011778.1 4 4 22 209 0.000289436 gene=EVM0011778
EVM0012955.1 MHONG_EVM0012955.1 4 4 12.4 421 0.000289436 gene=EVM0012955
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
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