Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0011162.1 MHONG_EVM0011162.1 4 3 5.1 494 0.000289436 gene=EVM0011162
EVM0011401.1 MHONG_EVM0011401.1 4 3 8.8 397 0.000289436 gene=EVM0011401
EVM0011704.1 MHONG_EVM0011704.1 4 3 25.6 121 0.000289436 gene=EVM0011704
EVM0011808.1 MHONG_EVM0011808.1 4 3 8.3 569 0.000289436 gene=EVM0011808
EVM0012989.1 MHONG_EVM0012989.1 4 3 8.2 402 0.000289436 gene=EVM0012989
EVM0013791.1 MHONG_EVM0013791.1 4 3 21.4 126 0.000289436 gene=EVM0013791
EVM0014379.1 MHONG_EVM0014379.1 4 3 14.6 151 0.000289436 gene=EVM0014379
EVM0014564.1 MHONG_EVM0014564.1 4 3 13 407 0.000289436 gene=EVM0014564
EVM0014624.1 MHONG_EVM0014624.1 4 3 13.2 182 0.000289436 gene=EVM0014624
EVM0014837.1 MHONG_EVM0014837.1 4 3 7.8 423 0.000289436 gene=EVM0014837
EVM0015279.1 MHONG_EVM0015279.1 4 3 18.5 157 0.00109769 gene=EVM0015279
KII60927.1 TKITA_KII60927.1 4 3 27.8 108 0.000289436 hypothetical protein RF11_13900 [Thelohanellus kitauei]
KII62396.1 TKITA_KII62396.1 4 3 9.3 356 0.000289436 Macrodomain Ter protein [Thelohanellus kitauei]
KII64873.1 TKITA_KII64873.1 4 3 4.6 712 0.000289436 hypothetical protein RF11_09283 [Thelohanellus kitauei]
KII65899.1 TKITA_KII65899.1 4 3 23.7 207 0.000289436 hypothetical protein RF11_03293 [Thelohanellus kitauei]
KII70779.1 TKITA_KII70779.1 4 3 13.9 303 0.000289436 hypothetical protein RF11_14939 [Thelohanellus kitauei]
KII72449.1 TKITA_KII72449.1 4 3 27.9 104 0.000289436 hypothetical protein RF11_09904 [Thelohanellus kitauei]
EVM0000398.1 MHONG_EVM0000398.1 3 3 9.7 309 0.000289436 gene=EVM0000398
EVM0001043.1 MHONG_EVM0001043.1 3 3 3.7 812 0.000289436 gene=EVM0001043
EVM0001115.1 MHONG_EVM0001115.1 3 3 3 1240 0.000289436 gene=EVM0001115
EVM0001728.1 MHONG_EVM0001728.1 3 3 16.1 218 0.000289436 gene=EVM0001728
EVM0001965.1 MHONG_EVM0001965.1 3 3 15.1 285 0.000289436 gene=EVM0001965
EVM0002404.1 MHONG_EVM0002404.1 3 3 16.3 215 0.000289436 gene=EVM0002404
EVM0002737.1 MHONG_EVM0002737.1 3 3 25.7 175 0.000289436 gene=EVM0002737
EVM0002827.1 MHONG_EVM0002827.1 3 3 13.7 211 0.000289436 gene=EVM0002827
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1… 14 15 16 17 18 19 20 … 56 Next › Last » of 56 pages
TOP