Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0002830.1 MHONG_EVM0002830.1 3 3 6.9 462 0.000289436 gene=EVM0002830
EVM0003198.1 MHONG_EVM0003198.1 3 3 32.7 110 0.000289436 gene=EVM0003198
EVM0003412.1 MHONG_EVM0003412.1 3 3 11.4 202 0.000289436 gene=EVM0003412
EVM0003433.1 MHONG_EVM0003433.1 3 3 10.4 278 0.000289436 gene=EVM0003433
EVM0003817.1 MHONG_EVM0003817.1 3 3 8.8 455 0.000289436 gene=EVM0003817
EVM0003865.1 MHONG_EVM0003865.1 3 3 14 228 0.000289436 gene=EVM0003865
EVM0004022.1 MHONG_EVM0004022.1 3 3 3.2 1006 0.000289436 gene=EVM0004022
EVM0004024.1 MHONG_EVM0004024.1 3 3 4.6 897 0.000289436 gene=EVM0004024
EVM0004346.1 MHONG_EVM0004346.1 3 3 6.3 508 0.000289436 gene=EVM0004346
EVM0004664.1 MHONG_EVM0004664.1 3 3 19.6 219 0.000289436 gene=EVM0004664
EVM0005238.1 MHONG_EVM0005238.1 3 3 9.1 408 0.000289436 gene=EVM0005238
EVM0005501.1 MHONG_EVM0005501.1 3 3 7.9 331 0.000289436 gene=EVM0005501
EVM0005612.1 MHONG_EVM0005612.1 3 3 7.6 381 0.000289436 gene=EVM0005612
EVM0005774.1 MHONG_EVM0005774.1 3 3 7.1 658 0.000289436 gene=EVM0005774
EVM0006104.1 MHONG_EVM0006104.1 3 3 19.8 162 0.000289436 gene=EVM0006104
EVM0006263.1 MHONG_EVM0006263.1 3 3 16.3 209 0.000289436 gene=EVM0006263
EVM0006577.1 MHONG_EVM0006577.1 3 3 13 293 0.000289436 gene=EVM0006577
EVM0006684.1 MHONG_EVM0006684.1 3 3 19.4 160 0.000289436 gene=EVM0006684
EVM0006831.1 MHONG_EVM0006831.1 3 3 7.7 349 0.000289436 gene=EVM0006831
EVM0007167.1 MHONG_EVM0007167.1 3 3 10.4 357 0.000289436 gene=EVM0007167
EVM0007172.1 MHONG_EVM0007172.1 3 3 8.3 503 0.000289436 gene=EVM0007172
EVM0007311.1 MHONG_EVM0007311.1 3 3 15.9 227 0.000289436 gene=EVM0007311
EVM0007357.1 MHONG_EVM0007357.1 3 3 8.7 332 0.000289436 gene=EVM0007357
EVM0007423.1 MHONG_EVM0007423.1 3 3 18.4 206 0.000289436 gene=EVM0007423
EVM0007670.1 MHONG_EVM0007670.1 3 3 18.5 168 0.000289436 gene=EVM0007670
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
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