Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0010657.1 MHONG_EVM0010657.1 31 15 39.9 446 0.000289436 gene=EVM0010657
EVM0010410.1 MHONG_EVM0010410.1 25 15 37.9 372 0.000289436 gene=EVM0010410
EVM0012184.1 MHONG_EVM0012184.1 20 15 20.6 908 0.000289436 gene=EVM0012184
EVM0000102.1 MHONG_EVM0000102.1 18 15 20.8 873 0.000289436 gene=EVM0000102
EVM0000288.1 MHONG_EVM0000288.1 17 15 42.2 384 0.000289436 gene=EVM0000288
EVM0011116.1 MHONG_EVM0011116.1 17 15 32.2 659 0.000289436 gene=EVM0011116
EVM0001353.1 MHONG_EVM0001353.1 22 14 26.5 426 0.000289436 gene=EVM0001353
EVM0005674.1 MHONG_EVM0005674.1 21 14 56.7 360 0.000289436 gene=EVM0005674
KII61271.1 TKITA_KII61271.1 21 14 47.9 357 0.000289436 hypothetical protein RF11_03067 [Thelohanellus kitauei]
EVM0001716.1 MHONG_EVM0001716.1 18 14 5.4 2075 0.000289436 gene=EVM0001716
EVM0000898.1 MHONG_EVM0000898.1 17 14 30.2 470 0.000289436 gene=EVM0000898
EVM0004499.1 MHONG_EVM0004499.1 15 14 31.3 511 0.000289436 gene=EVM0004499
EVM0002313.1 MHONG_EVM0002313.1 14 14 14.6 938 0.000289436 gene=EVM0002313
EVM0010652.1 MHONG_EVM0010652.1 22 13 46.9 356 0.000289436 gene=EVM0010652
EVM0007296.1 MHONG_EVM0007296.1 19 13 11.9 826 0.000289436 gene=EVM0007296
EVM0010287.1 MHONG_EVM0010287.1 19 13 29.2 466 0.000289436 gene=EVM0010287
EVM0011637.1 MHONG_EVM0011637.1 16 13 19.7 709 0.000289436 gene=EVM0011637
EVM0003243.1 MHONG_EVM0003243.1 15 13 17.3 834 0.000289436 gene=EVM0003243
EVM0008589.1 MHONG_EVM0008589.1 15 13 27.4 562 0.000289436 gene=EVM0008589
EVM0001051.1 MHONG_EVM0001051.1 13 13 7.4 1793 0.000289436 gene=EVM0001051
KII63280.1 TKITA_KII63280.1 31 12 33.3 516 0.000289436 hypothetical protein RF11_01887 [Thelohanellus kitauei]
EVM0008509.1 MHONG_EVM0008509.1 18 12 48.7 224 0.000289436 gene=EVM0008509
EVM0001610.1 MHONG_EVM0001610.1 17 12 17.7 762 0.000289436 gene=EVM0001610
EVM0006502.1 MHONG_EVM0006502.1 16 12 21.6 527 0.000289436 gene=EVM0006502
EVM0008981.1 MHONG_EVM0008981.1 16 12 24.5 519 0.000289436 gene=EVM0008981
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
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