Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0015284.1 MHONG_EVM0015284.1 10 9 9.3 1132 0.000289436 gene=EVM0015284
EVM0000429.1 MHONG_EVM0000429.1 9 9 30.8 292 0.000289436 gene=EVM0000429
EVM0002423.1 MHONG_EVM0002423.1 9 9 10.1 1111 0.000289436 gene=EVM0002423
EVM0005389.1 MHONG_EVM0005389.1 9 9 2.2 4389 0.000289436 gene=EVM0005389
EVM0006349.1 MHONG_EVM0006349.1 9 9 4.6 1979 0.000289436 gene=EVM0006349
EVM0008956.1 MHONG_EVM0008956.1 9 9 12.6 754 0.000289436 gene=EVM0008956
EVM0010574.1 MHONG_EVM0010574.1 9 9 21.9 475 0.000289436 gene=EVM0010574
EVM0012002.1 MHONG_EVM0012002.1 9 9 12.5 857 0.000289436 gene=EVM0012002
EVM0015294.1 MHONG_EVM0015294.1 9 9 15.2 723 0.000289436 gene=EVM0015294
EVM0014928.1 MHONG_EVM0014928.1 23 8 27.9 226 0.000289436 gene=EVM0014928
EVM0005533.1 MHONG_EVM0005533.1 15 8 22.5 315 0.000289436 gene=EVM0005533
EVM0014160.1 MHONG_EVM0014160.1 14 8 13.4 687 0.000289436 gene=EVM0014160
EVM0002774.1 MHONG_EVM0002774.1 13 8 6.5 1130 0.000289436 gene=EVM0002774
KII61660.1 TKITA_KII61660.1 13 8 15.2 375 0.000289436 Peptidyl-prolyl cis-trans isomerase G [Thelohanellus kitauei]
EVM0004729.1 MHONG_EVM0004729.1 12 8 14 573 0.000289436 gene=EVM0004729
EVM0012003.1 MHONG_EVM0012003.1 12 8 33.6 247 0.000289436 gene=EVM0012003
EVM0001534.1 MHONG_EVM0001534.1 11 8 30.7 244 0.000289436 gene=EVM0001534
EVM0010547.1 MHONG_EVM0010547.1 11 8 23.8 286 0.000289436 gene=EVM0010547
EVM0011218.1 MHONG_EVM0011218.1 11 8 34.9 169 0.000289436 gene=EVM0011218
EVM0012162.1 MHONG_EVM0012162.1 11 8 19.8 419 0.000289436 gene=EVM0012162
EVM0003607.1 MHONG_EVM0003607.1 10 8 32.4 238 0.000289436 gene=EVM0003607
EVM0004902.1 MHONG_EVM0004902.1 10 8 23.7 355 0.000289436 gene=EVM0004902
EVM0008919.1 MHONG_EVM0008919.1 10 8 30.3 346 0.000289436 gene=EVM0008919
EVM0013325.1 MHONG_EVM0013325.1 10 8 36.5 241 0.000289436 gene=EVM0013325
EVM0014032.1 MHONG_EVM0014032.1 10 8 3.6 2236 0.000289436 gene=EVM0014032
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
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