Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD018851

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts (cysts)
PRIDE accessionPXD018851
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1386
Peptides (q≤0.01)4672
PSMs (q≤0.01)6643
reprocessed against the CnidoSite reference proteome
30 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
KII61747.1 TKITA_KII61747.1 14 6 40 220 0.000289436 Feline leukemia virus subgroup C receptor-related protein 2 [Thelohanellus kitauei]
KII74189.1 TKITA_KII74189.1 14 6 35.8 165 0.000289436 hypothetical protein RF11_00563 [Thelohanellus kitauei]
KII72419.1 TKITA_KII72419.1 13 6 15.7 210 0.000289436 hypothetical protein RF11_03660 [Thelohanellus kitauei]
KII63109.1 TKITA_KII63109.1 12 6 22.3 269 0.000289436 hypothetical protein RF11_01859 [Thelohanellus kitauei]
KII66888.1 TKITA_KII66888.1 12 6 41.3 167 0.000289436 hypothetical protein RF11_12115 [Thelohanellus kitauei]
EVM0013802.1 MHONG_EVM0013802.1 11 6 39.3 173 0.000289436 gene=EVM0013802
EVM0006803.1 MHONG_EVM0006803.1 9 6 31.3 233 0.000289436 gene=EVM0006803
EVM0007272.1 MHONG_EVM0007272.1 9 6 14.2 451 0.000289436 gene=EVM0007272
EVM0009130.1 MHONG_EVM0009130.1 9 6 24.8 286 0.000289436 gene=EVM0009130
EVM0009656.1 MHONG_EVM0009656.1 9 6 28.6 199 0.000289436 gene=EVM0009656
EVM0012226.1 MHONG_EVM0012226.1 9 6 14.2 445 0.000289436 gene=EVM0012226
EVM0015318.1 MHONG_EVM0015318.1 9 6 50 164 0.000289436 gene=EVM0015318
KII64240.1 TKITA_KII64240.1 9 6 16.5 321 0.000289436 hypothetical protein RF11_02597 [Thelohanellus kitauei]
EVM0007543.1 MHONG_EVM0007543.1 8 6 33.8 148 0.000289436 gene=EVM0007543
EVM0007790.1 MHONG_EVM0007790.1 8 6 37.3 201 0.000289436 gene=EVM0007790
EVM0008489.1 MHONG_EVM0008489.1 8 6 28.4 229 0.000289436 gene=EVM0008489
EVM0011004.1 MHONG_EVM0011004.1 8 6 23.1 247 0.000289436 gene=EVM0011004
EVM0000024.1 MHONG_EVM0000024.1 7 6 26.2 256 0.000289436 gene=EVM0000024
EVM0001328.1 MHONG_EVM0001328.1 7 6 49.3 142 0.000289436 gene=EVM0001328
EVM0001372.1 MHONG_EVM0001372.1 7 6 9.8 716 0.000289436 gene=EVM0001372
EVM0004650.1 MHONG_EVM0004650.1 7 6 32.5 234 0.000289436 gene=EVM0004650
EVM0004881.1 MHONG_EVM0004881.1 7 6 28 239 0.000289436 gene=EVM0004881
EVM0009593.1 MHONG_EVM0009593.1 7 6 36.7 139 0.000289436 gene=EVM0009593
KII62450.1 TKITA_KII62450.1 7 6 23.7 334 0.000289436 hypothetical protein RF11_13821 [Thelohanellus kitauei]
KII66159.1 TKITA_KII66159.1 7 6 14.4 452 0.000289436 hypothetical protein RF11_11981 [Thelohanellus kitauei]
Total protein records: 1386  (+30 contaminants hidden)
Show: proteins per page
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