Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN109_c0_g3 | TRINITY_DN109_c0_g3_i1.p1 | 3 | 1 | 2.4 | 491 | 0.00606061 | |
| TRINITY_DN19039_c0_g1 | TRINITY_DN19039_c0_g1_i1.p1 | 3 | 1 | 12.3 | 114 | 0.00233645 | |
| TRINITY_DN22641_c0_g1 | TRINITY_DN22641_c0_g1_i1.p1 | 3 | 1 | 4.1 | 222 | 0.00233645 | |
| TRINITY_DN2586_c1_g1 | TRINITY_DN2586_c1_g1_i1.p1 | 3 | 1 | 3.5 | 369 | 0.00233645 | |
| TRINITY_DN2701_c0_g1 | TRINITY_DN2701_c0_g1_i1.p1 | 3 | 1 | 1.1 | 632 | 0.00606061 | |
| TRINITY_DN3745_c0_g1 | TRINITY_DN3745_c0_g1_i1.p1 | 3 | 1 | 0.7 | 1659 | 0.00233645 | |
| TRINITY_DN4209_c0_g1 | TRINITY_DN4209_c0_g1_i2.p1 | 3 | 1 | 10.6 | 113 | 0.00233645 | |
| TRINITY_DN4233_c0_g1 | TRINITY_DN4233_c0_g1_i2.p1 | 3 | 1 | 0.3 | 1718 | 0.00606061 | |
| TRINITY_DN8344_c0_g1 | TRINITY_DN8344_c0_g1_i1.p1 | 3 | 1 | 1 | 672 | 0.00233645 | |
| TRINITY_DN103_c0_g1 | TRINITY_DN103_c0_g1_i1.p1 | 2 | 1 | 1.6 | 440 | 0.00769231 | |
| TRINITY_DN10492_c0_g1 | TRINITY_DN10492_c0_g1_i5.p1 | 2 | 1 | 7.1 | 127 | 0.00233645 | |
| TRINITY_DN15912_c0_g1 | TRINITY_DN15912_c0_g1_i1.p1 | 2 | 1 | 3 | 200 | 0.00233645 | |
| TRINITY_DN16169_c0_g1 | TRINITY_DN16169_c0_g1_i1.p1 | 2 | 1 | 1.4 | 654 | 0.00436681 | |
| TRINITY_DN185_c0_g1 | TRINITY_DN185_c0_g1_i3.p1 | 2 | 1 | 2.1 | 528 | 0.00233645 | |
| TRINITY_DN3002_c0_g1 | TRINITY_DN3002_c0_g1_i1.p1 | 2 | 1 | 5.2 | 248 | 0.00233645 | |
| TRINITY_DN424_c0_g2 | TRINITY_DN424_c0_g2_i12.p1 | 2 | 1 | 15.1 | 119 | 0.00233645 | |
| TRINITY_DN5437_c0_g1 | TRINITY_DN5437_c0_g1_i1.p1 | 2 | 1 | 2 | 345 | 0.00769231 | |
| TRINITY_DN8154_c0_g1 | TRINITY_DN8154_c0_g1_i10.p5 | 2 | 1 | 6 | 250 | 0.00606061 | |
| TRINITY_DN886_c1_g1 | TRINITY_DN886_c1_g1_i1.p1 | 2 | 1 | 3 | 266 | 0.00606061 | |
| TRINITY_DN10311_c0_g1 | TRINITY_DN10311_c0_g1_i1.p1 | 1 | 1 | 2.1 | 289 | 0.00606061 | |
| TRINITY_DN11205_c0_g1 | TRINITY_DN11205_c0_g1_i1.p1 | 1 | 1 | 0.3 | 2374 | 0.00233645 | |
| TRINITY_DN1355_c2_g3 | TRINITY_DN1355_c2_g3_i1.p1 | 1 | 1 | 5.6 | 196 | 0.00606061 | |
| TRINITY_DN16390_c0_g1 | TRINITY_DN16390_c0_g1_i1.p1 | 1 | 1 | 1.9 | 524 | 0.00956023 | |
| TRINITY_DN18321_c0_g1 | TRINITY_DN18321_c0_g1_i1.p1 | 1 | 1 | 1.9 | 471 | 0.00606061 | |
| TRINITY_DN18369_c0_g1 | TRINITY_DN18369_c0_g1_i1.p1 | 1 | 1 | 1.9 | 360 | 0.00233645 |
