Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN5466_c0_g2 | TRINITY_DN5466_c0_g2_i1.p2 | 5 | 1 | 9.1 | 110 | 0.000124719 | |
| TRINITY_DN57232_c0_g3 | TRINITY_DN57232_c0_g3_i1.p1 | 5 | 1 | 8.8 | 136 | 0.000124719 | |
| TRINITY_DN594_c0_g1 | TRINITY_DN594_c0_g1_i2.p1 | 5 | 1 | 10 | 130 | 0.000124719 | |
| TRINITY_DN60581_c0_g1 | TRINITY_DN60581_c0_g1_i2.p1 | 5 | 1 | 7.6 | 105 | 0.000124719 | |
| TRINITY_DN7225_c0_g1 | TRINITY_DN7225_c0_g1_i7.p1 | 5 | 1 | 13.1 | 99 | 0.000124719 | |
| TRINITY_DN728_c2_g1 | TRINITY_DN728_c2_g1_i5.p1 | 5 | 1 | 4.4 | 137 | 0.00978441 | |
| TRINITY_DN7867_c0_g1 | TRINITY_DN7867_c0_g1_i10.p1 | 5 | 1 | 14.9 | 101 | 0.000124719 | |
| TRINITY_DN8097_c0_g1 | TRINITY_DN8097_c0_g1_i4.p1 | 5 | 1 | 11.9 | 135 | 0.000124719 | |
| TRINITY_DN8481_c0_g1 | TRINITY_DN8481_c0_g1_i4.p2 | 5 | 1 | 17 | 100 | 0.000124719 | |
| TRINITY_DN10179_c0_g1 | TRINITY_DN10179_c0_g1_i2.p1 | 4 | 1 | 10.8 | 111 | 0.000124719 | |
| TRINITY_DN1036_c0_g1 | TRINITY_DN1036_c0_g1_i2.p1 | 4 | 1 | 8.2 | 122 | 0.000124719 | |
| TRINITY_DN1117_c0_g2 | TRINITY_DN1117_c0_g2_i5.p1 | 4 | 1 | 7.3 | 123 | 0.000220897 | |
| TRINITY_DN116_c0_g4 | TRINITY_DN116_c0_g4_i1.p1 | 4 | 1 | 8.5 | 118 | 0.00125677 | |
| TRINITY_DN1176_c1_g2 | TRINITY_DN1176_c1_g2_i7.p1 | 4 | 1 | 6 | 168 | 0.000423639 | |
| TRINITY_DN11777_c0_g1 | TRINITY_DN11777_c0_g1_i4.p1 | 4 | 1 | 0 | 121 | 0.00499483 | |
| TRINITY_DN12030_c0_g1 | TRINITY_DN12030_c0_g1_i1.p1 | 4 | 1 | 7 | 158 | 0.000124719 | |
| TRINITY_DN12844_c0_g1 | TRINITY_DN12844_c0_g1_i4.p2 | 4 | 1 | 3.9 | 127 | 0.00492398 | |
| TRINITY_DN12952_c0_g3 | TRINITY_DN12952_c0_g3_i3.p1 | 4 | 1 | 0 | 96 | 0.000124719 | |
| TRINITY_DN13144_c1_g1 | TRINITY_DN13144_c1_g1_i1.p1 | 4 | 1 | 8.5 | 142 | 0.000124719 | |
| TRINITY_DN14803_c0_g1 | TRINITY_DN14803_c0_g1_i1.p1 | 4 | 1 | 10 | 110 | 0.000124719 | |
| TRINITY_DN1484_c0_g1 | TRINITY_DN1484_c0_g1_i20.p1 | 4 | 1 | 11.4 | 114 | 0.000124719 | |
| TRINITY_DN15589_c0_g1 | TRINITY_DN15589_c0_g1_i4.p2 | 4 | 1 | 5.8 | 104 | 0.00826515 | |
| TRINITY_DN15649_c0_g1 | TRINITY_DN15649_c0_g1_i9.p1 | 4 | 1 | 10.3 | 116 | 0.000220897 | |
| TRINITY_DN15712_c1_g1 | TRINITY_DN15712_c1_g1_i3.p1 | 4 | 1 | 3 | 201 | 0.000976944 | |
| TRINITY_DN15847_c0_g1 | TRINITY_DN15847_c0_g1_i4.p2 | 4 | 1 | 7.3 | 110 | 0.00709459 |
