Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN110_c1_g1 | TRINITY_DN110_c1_g1_i4.p2 | 3 | 1 | 20.2 | 104 | 0.000124719 | |
| TRINITY_DN11194_c0_g1 | TRINITY_DN11194_c0_g1_i4.p1 | 3 | 1 | 11.8 | 102 | 0.000124719 | |
| TRINITY_DN11261_c0_g1 | TRINITY_DN11261_c0_g1_i2.p1 | 3 | 1 | 4.3 | 139 | 0.00978441 | |
| TRINITY_DN11399_c0_g1 | TRINITY_DN11399_c0_g1_i14.p1 | 3 | 1 | 10.6 | 141 | 0.000124719 | |
| TRINITY_DN123_c1_g3 | TRINITY_DN123_c1_g3_i2.p1 | 3 | 1 | 6.2 | 211 | 0.000124719 | |
| TRINITY_DN12607_c0_g1 | TRINITY_DN12607_c0_g1_i5.p1 | 3 | 1 | 11 | 127 | 0.000124719 | |
| TRINITY_DN12904_c0_g1 | TRINITY_DN12904_c0_g1_i5.p1 | 3 | 1 | 6.4 | 140 | 0.000622536 | |
| TRINITY_DN12912_c0_g1 | TRINITY_DN12912_c0_g1_i1.p1 | 3 | 1 | 7.7 | 168 | 0.000124719 | |
| TRINITY_DN13888_c0_g1 | TRINITY_DN13888_c0_g1_i8.p1 | 3 | 1 | 9 | 100 | 0.00311582 | |
| TRINITY_DN14266_c0_g4 | TRINITY_DN14266_c0_g4_i4.p1 | 3 | 1 | 20 | 105 | 0.000124719 | |
| TRINITY_DN1476_c3_g1 | TRINITY_DN1476_c3_g1_i3.p1 | 3 | 1 | 8.5 | 118 | 0.000220897 | |
| TRINITY_DN14834_c0_g1 | TRINITY_DN14834_c0_g1_i2.p1 | 3 | 1 | 8.9 | 157 | 0.00169189 | |
| TRINITY_DN1526_c0_g1 | TRINITY_DN1526_c0_g1_i2.p1 | 3 | 1 | 7.1 | 113 | 0.00125677 | |
| TRINITY_DN15907_c1_g1 | TRINITY_DN15907_c1_g1_i1.p1 | 3 | 1 | 11 | 100 | 0.000713267 | |
| TRINITY_DN16148_c0_g3 | TRINITY_DN16148_c0_g3_i2.p1 | 3 | 1 | 6 | 183 | 0.000124719 | |
| TRINITY_DN1632_c0_g1 | TRINITY_DN1632_c0_g1_i1.p1 | 3 | 1 | 10.9 | 101 | 0.000220897 | |
| TRINITY_DN17367_c0_g2 | TRINITY_DN17367_c0_g2_i1.p2 | 3 | 1 | 9.3 | 108 | 0.000423639 | |
| TRINITY_DN17598_c0_g1 | TRINITY_DN17598_c0_g1_i1.p1 | 3 | 1 | 7.9 | 101 | 0.00318979 | |
| TRINITY_DN17807_c0_g1 | TRINITY_DN17807_c0_g1_i2.p1 | 3 | 1 | 6.9 | 102 | 0.00134112 | |
| TRINITY_DN1799_c0_g1 | TRINITY_DN1799_c0_g1_i1.p1 | 3 | 1 | 8.6 | 116 | 0.000124719 | |
| TRINITY_DN1880_c0_g3 | TRINITY_DN1880_c0_g3_i9.p1 | 3 | 1 | 6.9 | 130 | 0.00221832 | |
| TRINITY_DN1932_c0_g1 | TRINITY_DN1932_c0_g1_i11.p2 | 3 | 1 | 19.3 | 109 | 0.000124719 | |
| TRINITY_DN1959_c2_g1 | TRINITY_DN1959_c2_g1_i1.p1 | 3 | 1 | 15.2 | 105 | 0.000124719 | |
| TRINITY_DN197_c0_g4 | TRINITY_DN197_c0_g4_i1.p1 | 3 | 1 | 8.5 | 106 | 0.00263469 | |
| TRINITY_DN1970_c0_g2 | TRINITY_DN1970_c0_g2_i4.p2 | 3 | 1 | 4.6 | 175 | 0.00186759 |
