Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN49978_c0_g1 | TRINITY_DN49978_c0_g1_i2.p1 | 3 | 1 | 6.5 | 108 | 0.00287047 | |
| TRINITY_DN5_c0_g1 | TRINITY_DN5_c0_g1_i19.p1 | 3 | 1 | 2.8 | 249 | 0.000713267 | |
| TRINITY_DN51089_c0_g1 | TRINITY_DN51089_c0_g1_i2.p2 | 3 | 1 | 10.3 | 107 | 0.000124719 | |
| TRINITY_DN52605_c0_g1 | TRINITY_DN52605_c0_g1_i1.p1 | 3 | 1 | 5.6 | 125 | 0.00125677 | |
| TRINITY_DN53062_c0_g1 | TRINITY_DN53062_c0_g1_i3.p1 | 3 | 1 | 10.6 | 123 | 0.000124719 | |
| TRINITY_DN54094_c0_g1 | TRINITY_DN54094_c0_g1_i1.p1 | 3 | 1 | 11 | 100 | 0.000220897 | |
| TRINITY_DN56557_c0_g1 | TRINITY_DN56557_c0_g1_i1.p2 | 3 | 1 | 11.1 | 117 | 0.000124719 | |
| TRINITY_DN57026_c0_g1 | TRINITY_DN57026_c0_g1_i1.p1 | 3 | 1 | 7.4 | 135 | 0.000220897 | |
| TRINITY_DN59232_c0_g1 | TRINITY_DN59232_c0_g1_i2.p2 | 3 | 1 | 5.2 | 193 | 0.000124719 | |
| TRINITY_DN6171_c0_g1 | TRINITY_DN6171_c0_g1_i3.p1 | 3 | 1 | 22.8 | 123 | 0.000124719 | |
| TRINITY_DN6219_c2_g1 | TRINITY_DN6219_c2_g1_i16.p1 | 3 | 1 | 9.9 | 151 | 0.000976944 | |
| TRINITY_DN6307_c0_g1 | TRINITY_DN6307_c0_g1_i12.p1 | 3 | 1 | 5.5 | 127 | 0.00318979 | |
| TRINITY_DN6361_c0_g3 | TRINITY_DN6361_c0_g3_i1.p1 | 3 | 1 | 6 | 100 | 0.000423639 | |
| TRINITY_DN6995_c0_g1 | TRINITY_DN6995_c0_g1_i1.p1 | 3 | 1 | 7.1 | 98 | 0.0088179 | |
| TRINITY_DN7101_c0_g1 | TRINITY_DN7101_c0_g1_i2.p1 | 3 | 1 | 8.3 | 120 | 0.000124719 | |
| TRINITY_DN7131_c0_g1 | TRINITY_DN7131_c0_g1_i16.p1 | 3 | 1 | 8 | 112 | 0.00134112 | |
| TRINITY_DN724_c0_g1 | TRINITY_DN724_c0_g1_i21.p1 | 3 | 1 | 10 | 120 | 0.000124719 | |
| TRINITY_DN7721_c0_g3 | TRINITY_DN7721_c0_g3_i1.p2 | 3 | 1 | 7.8 | 115 | 0.000124719 | |
| TRINITY_DN7867_c0_g3 | TRINITY_DN7867_c0_g3_i1.p1 | 3 | 1 | 10.3 | 97 | 0.000220897 | |
| TRINITY_DN8181_c0_g1 | TRINITY_DN8181_c0_g1_i2.p1 | 3 | 1 | 11 | 109 | 0.000124719 | |
| TRINITY_DN8292_c0_g1 | TRINITY_DN8292_c0_g1_i1.p1 | 3 | 1 | 12 | 100 | 0.000124719 | |
| TRINITY_DN840_c0_g1 | TRINITY_DN840_c0_g1_i12.p1 | 3 | 1 | 11 | 100 | 0.000124719 | |
| TRINITY_DN852_c0_g1 | TRINITY_DN852_c0_g1_i4.p1 | 3 | 1 | 8.3 | 145 | 0.000124719 | |
| TRINITY_DN8525_c0_g1 | TRINITY_DN8525_c0_g1_i2.p1 | 3 | 1 | 7.6 | 105 | 0.000976944 | |
| TRINITY_DN8718_c0_g2 | TRINITY_DN8718_c0_g2_i1.p4 | 3 | 1 | 14 | 129 | 0.000124719 |
