Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN9680_c0_g5 | TRINITY_DN9680_c0_g5_i1.p1 | 2 | 1 | 6.9 | 131 | 0.00597372 | |
| TRINITY_DN995_c0_g1 | TRINITY_DN995_c0_g1_i8.p1 | 2 | 1 | 5 | 121 | 0.00962336 | |
| TRINITY_DN10380_c0_g1 | TRINITY_DN10380_c0_g1_i1.p1 | 1 | 1 | 10.7 | 112 | 0.00709459 | |
| TRINITY_DN1058_c0_g1 | TRINITY_DN1058_c0_g1_i1.p1 | 1 | 1 | 9.7 | 103 | 0.000124719 | |
| TRINITY_DN10622_c0_g1 | TRINITY_DN10622_c0_g1_i10.p1 | 1 | 1 | 8.1 | 123 | 0.000124719 | |
| TRINITY_DN10670_c0_g1 | TRINITY_DN10670_c0_g1_i3.p1 | 1 | 1 | 10.8 | 120 | 0.000423639 | |
| TRINITY_DN1073_c1_g1 | TRINITY_DN1073_c1_g1_i8.p1 | 1 | 1 | 7.5 | 147 | 0.000976944 | |
| TRINITY_DN10943_c0_g1 | TRINITY_DN10943_c0_g1_i5.p1 | 1 | 1 | 7.9 | 140 | 0.000124719 | |
| TRINITY_DN1101_c0_g1 | TRINITY_DN1101_c0_g1_i8.p1 | 1 | 1 | 4.8 | 166 | 0.000976944 | |
| TRINITY_DN11122_c0_g1 | TRINITY_DN11122_c0_g1_i1.p2 | 1 | 1 | 5 | 140 | 0.000423639 | |
| TRINITY_DN11139_c0_g1 | TRINITY_DN11139_c0_g1_i5.p1 | 1 | 1 | 6.7 | 104 | 0.00499483 | |
| TRINITY_DN11251_c0_g2 | TRINITY_DN11251_c0_g2_i2.p1 | 1 | 1 | 8.3 | 120 | 0.000220897 | |
| TRINITY_DN11319_c0_g1 | TRINITY_DN11319_c0_g1_i4.p1 | 1 | 1 | 8.8 | 136 | 0.000124719 | |
| TRINITY_DN11460_c0_g1 | TRINITY_DN11460_c0_g1_i17.p1 | 1 | 1 | 6.1 | 147 | 0.00946137 | |
| TRINITY_DN11489_c0_g1 | TRINITY_DN11489_c0_g1_i5.p1 | 1 | 1 | 6.5 | 124 | 0.000220897 | |
| TRINITY_DN1170_c0_g1 | TRINITY_DN1170_c0_g1_i12.p1 | 1 | 1 | 7.1 | 126 | 0.000976944 | |
| TRINITY_DN1175_c0_g1 | TRINITY_DN1175_c0_g1_i10.p1 | 1 | 1 | 8.8 | 113 | 0.00402063 | |
| TRINITY_DN11891_c0_g1 | TRINITY_DN11891_c0_g1_i14.p1 | 1 | 1 | 8.9 | 190 | 0.000124719 | |
| TRINITY_DN1210_c0_g1 | TRINITY_DN1210_c0_g1_i6.p1 | 1 | 1 | 6.5 | 108 | 0.000976944 | |
| TRINITY_DN12195_c0_g2 | TRINITY_DN12195_c0_g2_i1.p1 | 1 | 1 | 13.5 | 148 | 0.000124719 | |
| TRINITY_DN1222_c0_g2 | TRINITY_DN1222_c0_g2_i4.p1 | 1 | 1 | 9.6 | 125 | 0.000124719 | |
| TRINITY_DN13134_c0_g1 | TRINITY_DN13134_c0_g1_i1.p1 | 1 | 1 | 10.2 | 118 | 0.000976944 | |
| TRINITY_DN13235_c0_g4 | TRINITY_DN13235_c0_g4_i1.p1 | 1 | 1 | 10.3 | 126 | 0.000124719 | |
| TRINITY_DN13258_c0_g1 | TRINITY_DN13258_c0_g1_i2.p1 | 1 | 1 | 7.7 | 117 | 0.00230415 | |
| TRINITY_DN13293_c0_g1 | TRINITY_DN13293_c0_g1_i1.p1 | 1 | 1 | 7 | 114 | 0.00318979 |
