Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN21069_c0_g1 | TRINITY_DN21069_c0_g1_i1.p1 | 1 | 1 | 15.1 | 159 | 0.00425717 | |
| TRINITY_DN2168_c0_g1 | TRINITY_DN2168_c0_g1_i12.p1 | 1 | 1 | 7 | 128 | 0.000976944 | |
| TRINITY_DN21831_c0_g1 | TRINITY_DN21831_c0_g1_i4.p2 | 1 | 1 | 12.9 | 116 | 0.000220897 | |
| TRINITY_DN2184_c0_g1 | TRINITY_DN2184_c0_g1_i1.p1 | 1 | 1 | 7.7 | 155 | 0.00991572 | |
| TRINITY_DN22_c18_g1 | TRINITY_DN22_c18_g1_i1.p1 | 1 | 1 | 6.1 | 99 | 0.0088179 | |
| TRINITY_DN22509_c0_g1 | TRINITY_DN22509_c0_g1_i2.p1 | 1 | 1 | 9.6 | 104 | 0.00134112 | |
| TRINITY_DN2303_c0_g1 | TRINITY_DN2303_c0_g1_i6.p1 | 1 | 1 | 5.1 | 176 | 0.000124719 | |
| TRINITY_DN23286_c1_g1 | TRINITY_DN23286_c1_g1_i1.p1 | 1 | 1 | 18 | 128 | 0.000124719 | |
| TRINITY_DN2382_c0_g2 | TRINITY_DN2382_c0_g2_i15.p1 | 1 | 1 | 6.9 | 116 | 0.00709459 | |
| TRINITY_DN23924_c0_g2 | TRINITY_DN23924_c0_g2_i2.p1 | 1 | 1 | 12 | 100 | 0.000622536 | |
| TRINITY_DN24081_c0_g1 | TRINITY_DN24081_c0_g1_i3.p1 | 1 | 1 | 14.7 | 102 | 0.000124719 | |
| TRINITY_DN25979_c0_g1 | TRINITY_DN25979_c0_g1_i1.p3 | 1 | 1 | 12.1 | 116 | 0.00834516 | |
| TRINITY_DN2610_c0_g1 | TRINITY_DN2610_c0_g1_i10.p1 | 1 | 1 | 13.3 | 120 | 0.000976944 | |
| TRINITY_DN26251_c0_g1 | TRINITY_DN26251_c0_g1_i1.p1 | 1 | 1 | 6.5 | 123 | 0.00278953 | |
| TRINITY_DN26310_c0_g1 | TRINITY_DN26310_c0_g1_i1.p1 | 1 | 1 | 11.2 | 107 | 0.00263469 | |
| TRINITY_DN2645_c0_g4 | TRINITY_DN2645_c0_g4_i1.p2 | 1 | 1 | 12.6 | 111 | 0.000124719 | |
| TRINITY_DN2674_c0_g1 | TRINITY_DN2674_c0_g1_i7.p1 | 1 | 1 | 5.8 | 154 | 0.000124719 | |
| TRINITY_DN2714_c0_g1 | TRINITY_DN2714_c0_g1_i2.p1 | 1 | 1 | 7.9 | 114 | 0.000713267 | |
| TRINITY_DN27272_c0_g1 | TRINITY_DN27272_c0_g1_i1.p1 | 1 | 1 | 18.2 | 99 | 0.000124719 | |
| TRINITY_DN2765_c0_g2 | TRINITY_DN2765_c0_g2_i2.p1 | 1 | 1 | 11.6 | 121 | 0.000124719 | |
| TRINITY_DN27829_c0_g1 | TRINITY_DN27829_c0_g1_i1.p1 | 1 | 1 | 8.8 | 159 | 0.00278953 | |
| TRINITY_DN27972_c0_g1 | TRINITY_DN27972_c0_g1_i1.p1 | 1 | 1 | 10.9 | 156 | 0.000124719 | |
| TRINITY_DN28816_c0_g1 | TRINITY_DN28816_c0_g1_i1.p1 | 1 | 1 | 12.3 | 114 | 0.000124719 | |
| TRINITY_DN2950_c0_g1 | TRINITY_DN2950_c0_g1_i15.p1 | 1 | 1 | 9 | 111 | 0.00506394 | |
| TRINITY_DN2956_c0_g3 | TRINITY_DN2956_c0_g3_i1.p1 | 1 | 1 | 3.6 | 307 | 0.00613445 |
