Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN4394_c0_g2 | TRINITY_DN4394_c0_g2_i5.p1 | 1 | 1 | 11.1 | 117 | 0.00134112 | |
| TRINITY_DN4406_c0_g1 | TRINITY_DN4406_c0_g1_i1.p1 | 1 | 1 | 10.3 | 155 | 0.000124719 | |
| TRINITY_DN4478_c0_g1 | TRINITY_DN4478_c0_g1_i2.p1 | 1 | 1 | 16.1 | 118 | 0.000124719 | |
| TRINITY_DN4512_c0_g1 | TRINITY_DN4512_c0_g1_i1.p1 | 1 | 1 | 22.2 | 108 | 0.000622536 | |
| TRINITY_DN4549_c0_g1 | TRINITY_DN4549_c0_g1_i1.p1 | 1 | 1 | 16.1 | 112 | 0.000124719 | |
| TRINITY_DN4645_c0_g2 | TRINITY_DN4645_c0_g2_i5.p1 | 1 | 1 | 9 | 111 | 0.000124719 | |
| TRINITY_DN4670_c0_g1 | TRINITY_DN4670_c0_g1_i2.p1 | 1 | 1 | 13.5 | 133 | 0.00730663 | |
| TRINITY_DN4898_c1_g1 | TRINITY_DN4898_c1_g1_i7.p1 | 1 | 1 | 6.3 | 158 | 0.00730663 | |
| TRINITY_DN49696_c0_g1 | TRINITY_DN49696_c0_g1_i2.p1 | 1 | 1 | 5.6 | 125 | 0.00410122 | |
| TRINITY_DN49758_c0_g3 | TRINITY_DN49758_c0_g3_i1.p1 | 1 | 1 | 13.7 | 102 | 0.000124719 | |
| TRINITY_DN49806_c0_g1 | TRINITY_DN49806_c0_g1_i1.p1 | 1 | 1 | 11.5 | 156 | 0.000124719 | |
| TRINITY_DN5_c1_g2 | TRINITY_DN5_c1_g2_i1.p1 | 1 | 1 | 10.1 | 129 | 0.000622536 | |
| TRINITY_DN50087_c0_g2 | TRINITY_DN50087_c0_g2_i1.p1 | 1 | 1 | 3.2 | 157 | 0.0088179 | |
| TRINITY_DN5061_c0_g1 | TRINITY_DN5061_c0_g1_i2.p1 | 1 | 1 | 7.6 | 119 | 0.00589341 | |
| TRINITY_DN50759_c0_g1 | TRINITY_DN50759_c0_g1_i1.p1 | 1 | 1 | 8.1 | 99 | 0.00221832 | |
| TRINITY_DN5323_c0_g1 | TRINITY_DN5323_c0_g1_i2.p1 | 1 | 1 | 13.3 | 113 | 0.00709459 | |
| TRINITY_DN5352_c1_g1 | TRINITY_DN5352_c1_g1_i2.p2 | 1 | 1 | 12.5 | 104 | 0.000124719 | |
| TRINITY_DN5403_c0_g2 | TRINITY_DN5403_c0_g2_i3.p1 | 1 | 1 | 5.2 | 232 | 0.000124719 | |
| TRINITY_DN54274_c0_g1 | TRINITY_DN54274_c0_g1_i1.p1 | 1 | 1 | 10.2 | 118 | 0.00669435 | |
| TRINITY_DN5586_c1_g1 | TRINITY_DN5586_c1_g1_i1.p1 | 1 | 1 | 16.8 | 107 | 0.000713267 | |
| TRINITY_DN559_c0_g2 | TRINITY_DN559_c0_g2_i2.p1 | 1 | 1 | 12.8 | 133 | 0.000124719 | |
| TRINITY_DN56475_c0_g3 | TRINITY_DN56475_c0_g3_i1.p1 | 1 | 1 | 4.5 | 157 | 0.00195622 | |
| TRINITY_DN5684_c0_g1 | TRINITY_DN5684_c0_g1_i1.p1 | 1 | 1 | 9.9 | 101 | 0.00134112 | |
| TRINITY_DN5917_c0_g1 | TRINITY_DN5917_c0_g1_i1.p1 | 1 | 1 | 14 | 129 | 0.000124719 | |
| TRINITY_DN596_c0_g1 | TRINITY_DN596_c0_g1_i4.p1 | 1 | 1 | 11.5 | 104 | 0.000124719 |
