Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN6031_c0_g2 | TRINITY_DN6031_c0_g2_i5.p1 | 1 | 1 | 6.7 | 149 | 0.00499483 | |
| TRINITY_DN6112_c0_g3 | TRINITY_DN6112_c0_g3_i3.p1 | 1 | 1 | 11 | 145 | 0.000622536 | |
| TRINITY_DN6123_c0_g1 | TRINITY_DN6123_c0_g1_i12.p1 | 1 | 1 | 12.5 | 192 | 0.000124719 | |
| TRINITY_DN6219_c1_g1 | TRINITY_DN6219_c1_g1_i21.p1 | 1 | 1 | 5.7 | 157 | 0.00247706 | |
| TRINITY_DN6259_c2_g1 | TRINITY_DN6259_c2_g1_i1.p1 | 1 | 1 | 4.3 | 184 | 0.000423639 | |
| TRINITY_DN633_c0_g1 | TRINITY_DN633_c0_g1_i19.p1 | 1 | 1 | 15.6 | 109 | 0.000124719 | |
| TRINITY_DN6472_c1_g1 | TRINITY_DN6472_c1_g1_i3.p1 | 1 | 1 | 8.5 | 188 | 0.000124719 | |
| TRINITY_DN652_c1_g1 | TRINITY_DN652_c1_g1_i2.p1 | 1 | 1 | 10.6 | 104 | 0.000124719 | |
| TRINITY_DN680_c0_g1 | TRINITY_DN680_c0_g1_i10.p1 | 1 | 1 | 8.1 | 123 | 0.000124719 | |
| TRINITY_DN688_c0_g1 | TRINITY_DN688_c0_g1_i4.p1 | 1 | 1 | 5.4 | 184 | 0.000124719 | |
| TRINITY_DN6906_c1_g1 | TRINITY_DN6906_c1_g1_i11.p1 | 1 | 1 | 10.7 | 131 | 0.000220897 | |
| TRINITY_DN6939_c0_g2 | TRINITY_DN6939_c0_g2_i1.p1 | 1 | 1 | 13.1 | 99 | 0.000124719 | |
| TRINITY_DN7058_c0_g1 | TRINITY_DN7058_c0_g1_i7.p1 | 1 | 1 | 8.1 | 99 | 0.00221832 | |
| TRINITY_DN7298_c0_g1 | TRINITY_DN7298_c0_g1_i2.p2 | 1 | 1 | 15.5 | 110 | 0.007022 | |
| TRINITY_DN746_c0_g3 | TRINITY_DN746_c0_g3_i2.p1 | 1 | 1 | 6 | 133 | 0.00230415 | |
| TRINITY_DN7529_c0_g2 | TRINITY_DN7529_c0_g2_i3.p1 | 1 | 1 | 6.8 | 133 | 0.00425717 | |
| TRINITY_DN7579_c0_g1 | TRINITY_DN7579_c0_g1_i3.p1 | 1 | 1 | 8.1 | 160 | 0.000124719 | |
| TRINITY_DN7637_c0_g1 | TRINITY_DN7637_c0_g1_i2.p1 | 1 | 1 | 7.7 | 104 | 0.00506394 | |
| TRINITY_DN770_c0_g1 | TRINITY_DN770_c0_g1_i16.p1 | 1 | 1 | 10 | 150 | 0.000124719 | |
| TRINITY_DN7722_c0_g3 | TRINITY_DN7722_c0_g3_i2.p1 | 1 | 1 | 6.7 | 149 | 0.000124719 | |
| TRINITY_DN7775_c0_g2 | TRINITY_DN7775_c0_g2_i1.p1 | 1 | 1 | 0 | 114 | 0.00709459 | |
| TRINITY_DN7822_c0_g5 | TRINITY_DN7822_c0_g5_i1.p1 | 1 | 1 | 6.1 | 131 | 0.00458319 | |
| TRINITY_DN7940_c1_g3 | TRINITY_DN7940_c1_g3_i1.p1 | 1 | 1 | 8.6 | 163 | 0.000220897 | |
| TRINITY_DN8073_c0_g1 | TRINITY_DN8073_c0_g1_i1.p1 | 1 | 1 | 9.9 | 101 | 0.000220897 | |
| TRINITY_DN8157_c0_g1 | TRINITY_DN8157_c0_g1_i3.p1 | 1 | 1 | 13.5 | 111 | 0.000220897 |
