Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| TRINITY_DN8229_c1_g1 | TRINITY_DN8229_c1_g1_i1.p1 | 1 | 1 | 5.4 | 205 | 0.000713267 | |
| TRINITY_DN8286_c0_g2 | TRINITY_DN8286_c0_g2_i1.p1 | 1 | 1 | 9.8 | 102 | 0.000976944 | |
| TRINITY_DN8296_c0_g2 | TRINITY_DN8296_c0_g2_i2.p2 | 1 | 1 | 8.2 | 147 | 0.000124719 | |
| TRINITY_DN831_c3_g1 | TRINITY_DN831_c3_g1_i1.p1 | 1 | 1 | 8.8 | 114 | 0.000124719 | |
| TRINITY_DN8892_c0_g2 | TRINITY_DN8892_c0_g2_i1.p1 | 1 | 1 | 7.5 | 173 | 0.00522618 | |
| TRINITY_DN9082_c0_g4 | TRINITY_DN9082_c0_g4_i6.p1 | 1 | 1 | 5.2 | 134 | 0.000220897 | |
| TRINITY_DN9181_c0_g1 | TRINITY_DN9181_c0_g1_i1.p3 | 1 | 1 | 9.6 | 125 | 0.00762399 | |
| TRINITY_DN9271_c0_g3 | TRINITY_DN9271_c0_g3_i17.p1 | 1 | 1 | 12.2 | 115 | 0.00081276 | |
| TRINITY_DN9273_c0_g1 | TRINITY_DN9273_c0_g1_i2.p1 | 1 | 1 | 6.6 | 121 | 0.000423639 | |
| TRINITY_DN9371_c0_g1 | TRINITY_DN9371_c0_g1_i10.p2 | 1 | 1 | 7.8 | 102 | 0.00730663 | |
| TRINITY_DN950_c1_g2 | TRINITY_DN950_c1_g2_i1.p1 | 1 | 1 | 5.8 | 103 | 0.00230415 | |
| TRINITY_DN9833_c1_g2 | TRINITY_DN9833_c1_g2_i2.p1 | 1 | 1 | 4.1 | 197 | 0.00637701 | |
| TRINITY_DN9921_c1_g1 | TRINITY_DN9921_c1_g1_i12.p2 | 1 | 1 | 9.1 | 154 | 0.000220897 | |
| TRINITY_DN9926_c0_g1 | TRINITY_DN9926_c0_g1_i6.p1 | 1 | 1 | 8.8 | 102 | 0.00425717 |
