Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD030136

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts
PRIDE accessionPXD030136
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1669
Peptides (q≤0.01)6436
PSMs (q≤0.01)20078
reprocessed against the CnidoSite reference proteome
29 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0007958.1 MHONG_EVM0007958.1 598 66 39.9 1507 0.000254065 gene=EVM0007958
EVM0013745.1 MHONG_EVM0013745.1 181 57 38.1 1575 0.000254065 gene=EVM0013745
KII74575.1 TKITA_KII74575.1 110 42 28.1 1592 0.000254065 hypothetical protein RF11_16185 [Thelohanellus kitauei]
EVM0008257.1 MHONG_EVM0008257.1 138 39 26 1820 0.000254065 gene=EVM0008257
KII71942.1 TKITA_KII71942.1 99 32 30.1 1089 0.000254065 GTP-binding protein 1 [Thelohanellus kitauei]
KII73242.1 TKITA_KII73242.1 360 27 39.7 517 0.000254065 Serum response factor [Thelohanellus kitauei]
EVM0011333.1 MHONG_EVM0011333.1 143 26 43.9 697 0.000254065 gene=EVM0011333
EVM0003529.1 MHONG_EVM0003529.1 93 26 68.2 488 0.000254065 gene=EVM0003529
EVM0011848.1 MHONG_EVM0011848.1 64 26 18.2 1692 0.000254065 gene=EVM0011848
EVM0010657.1 MHONG_EVM0010657.1 106 24 64.8 446 0.000254065 gene=EVM0010657
KII73715.1 TKITA_KII73715.1 101 24 48.4 636 0.000254065 hypothetical protein RF11_11013 [Thelohanellus kitauei]
KII64171.1 TKITA_KII64171.1 75 24 59.1 435 0.000254065 hypothetical protein RF11_03226 [Thelohanellus kitauei]
EVM0001225.1 MHONG_EVM0001225.1 68 24 69.8 368 0.000254065 gene=EVM0001225
EVM0011159.1 MHONG_EVM0011159.1 49 24 17.6 1337 0.000254065 gene=EVM0011159
EVM0014152.1 MHONG_EVM0014152.1 168 23 60.6 391 0.000254065 gene=EVM0014152
KII64277.1 TKITA_KII64277.1 98 23 21.7 1141 0.000254065 hypothetical protein RF11_10945 [Thelohanellus kitauei]
EVM0012092.1 MHONG_EVM0012092.1 60 23 28.4 1021 0.000254065 gene=EVM0012092
EVM0006432.1 MHONG_EVM0006432.1 55 22 36 592 0.000254065 gene=EVM0006432
EVM0002878.1 MHONG_EVM0002878.1 112 21 24.8 789 0.000254065 gene=EVM0002878
EVM0002470.1 MHONG_EVM0002470.1 37 21 19.8 1200 0.000254065 gene=EVM0002470
EVM0001034.1 MHONG_EVM0001034.1 86 20 19.4 1128 0.000254065 gene=EVM0001034
EVM0001418.1 MHONG_EVM0001418.1 84 20 43.1 385 0.000254065 gene=EVM0001418
EVM0012429.1 MHONG_EVM0012429.1 77 20 50.7 458 0.000254065 gene=EVM0012429
EVM0010410.1 MHONG_EVM0010410.1 66 19 46.8 372 0.000254065 gene=EVM0010410
EVM0002233.1 MHONG_EVM0002233.1 61 19 40.9 367 0.000254065 gene=EVM0002233
Total protein records: 1669  (+29 contaminants hidden)
Show: proteins per page
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