Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD030136

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts
PRIDE accessionPXD030136
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1669
Peptides (q≤0.01)6436
PSMs (q≤0.01)20078
reprocessed against the CnidoSite reference proteome
29 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0008919.1 MHONG_EVM0008919.1 30 11 37.6 346 0.000254065 gene=EVM0008919
EVM0014128.1 MHONG_EVM0014128.1 30 11 31.8 434 0.000254065 gene=EVM0014128
EVM0007238.1 MHONG_EVM0007238.1 29 11 28.4 327 0.000254065 gene=EVM0007238
EVM0007915.1 MHONG_EVM0007915.1 29 11 15.4 790 0.000254065 gene=EVM0007915
EVM0010496.1 MHONG_EVM0010496.1 29 11 31.7 382 0.000254065 gene=EVM0010496
EVM0011456.1 MHONG_EVM0011456.1 29 11 20.9 445 0.000254065 gene=EVM0011456
EVM0003016.1 MHONG_EVM0003016.1 27 11 39.7 252 0.000254065 gene=EVM0003016
EVM0008956.1 MHONG_EVM0008956.1 26 11 16 754 0.000254065 gene=EVM0008956
EVM0012656.1 MHONG_EVM0012656.1 25 11 46.8 173 0.000254065 gene=EVM0012656
EVM0002739.1 MHONG_EVM0002739.1 24 11 32.7 349 0.000254065 gene=EVM0002739
EVM0003393.1 MHONG_EVM0003393.1 21 11 38 300 0.000254065 gene=EVM0003393
EVM0015294.1 MHONG_EVM0015294.1 20 11 19.5 723 0.000254065 gene=EVM0015294
EVM0014225.1 MHONG_EVM0014225.1 149 10 27.3 462 0.000254065 gene=EVM0014225
EVM0001481.1 MHONG_EVM0001481.1 77 10 38 208 0.000254065 gene=EVM0001481
EVM0011055.1 MHONG_EVM0011055.1 53 10 17.2 574 0.000254065 gene=EVM0011055
EVM0005533.1 MHONG_EVM0005533.1 51 10 27.6 315 0.000254065 gene=EVM0005533
EVM0014160.1 MHONG_EVM0014160.1 43 10 16 687 0.000254065 gene=EVM0014160
KII68449.1 TKITA_KII68449.1 36 10 36.8 342 0.000254065 hypothetical protein RF11_10807 [Thelohanellus kitauei]
EVM0014265.1 MHONG_EVM0014265.1 34 10 37.1 251 0.000254065 gene=EVM0014265
EVM0001534.1 MHONG_EVM0001534.1 32 10 36.9 244 0.000254065 gene=EVM0001534
EVM0005229.1 MHONG_EVM0005229.1 32 10 75.2 149 0.000254065 gene=EVM0005229
EVM0014659.1 MHONG_EVM0014659.1 32 10 31.5 432 0.000254065 gene=EVM0014659
EVM0003007.1 MHONG_EVM0003007.1 31 10 32.9 350 0.000254065 gene=EVM0003007
EVM0010534.1 MHONG_EVM0010534.1 30 10 14.5 691 0.000254065 gene=EVM0010534
KII61310.1 TKITA_KII61310.1 29 10 44.7 302 0.000254065 hypothetical protein RF11_06474 [Thelohanellus kitauei]
Total protein records: 1669  (+29 contaminants hidden)
Show: proteins per page
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