Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD030136

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts
PRIDE accessionPXD030136
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1669
Peptides (q≤0.01)6436
PSMs (q≤0.01)20078
reprocessed against the CnidoSite reference proteome
29 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0009829.4 MHONG_EVM0009829.4 2 1 5 262 0.000254065 gene=EVM0009829
EVM0009960.1 MHONG_EVM0009960.1 2 1 2.6 350 0.00129414 gene=EVM0009960
EVM0009962.1 MHONG_EVM0009962.1 2 1 3 305 0.000254065 gene=EVM0009962
EVM0009989.1 MHONG_EVM0009989.1 2 1 2.3 395 0.000981354 gene=EVM0009989
EVM0010085.1 MHONG_EVM0010085.1 2 1 9 133 0.000254065 gene=EVM0010085
EVM0010102.1 MHONG_EVM0010102.1 2 1 5.4 336 0.000254065 gene=EVM0010102
EVM0010432.1 MHONG_EVM0010432.1 2 1 4.4 272 0.000254065 gene=EVM0010432
EVM0010500.1 MHONG_EVM0010500.1 2 1 3.9 284 0.000254065 gene=EVM0010500
EVM0010670.1 MHONG_EVM0010670.1 2 1 3.5 282 0.000254065 gene=EVM0010670
EVM0010710.1 MHONG_EVM0010710.1 2 1 2.7 407 0.000851426 gene=EVM0010710
EVM0010730.1 MHONG_EVM0010730.1 2 1 2.7 368 0.000680118 gene=EVM0010730
EVM0010809.1 MHONG_EVM0010809.1 2 1 1.9 735 0.000254065 gene=EVM0010809
EVM0010960.1 MHONG_EVM0010960.1 2 1 4.3 391 0.000254065 gene=EVM0010960
EVM0011008.1 MHONG_EVM0011008.1 2 1 9.3 107 0.000475511 gene=EVM0011008
EVM0011015.1 MHONG_EVM0011015.1 2 1 0.9 1236 0.00741577 gene=EVM0011015
EVM0011032.1 MHONG_EVM0011032.1 2 1 2.5 405 0.000254065 gene=EVM0011032
EVM0011041.1 MHONG_EVM0011041.1 2 1 6.5 232 0.000254065 gene=EVM0011041
EVM0011154.1 MHONG_EVM0011154.1 2 1 4.6 306 0.000254065 gene=EVM0011154
EVM0011178.1 MHONG_EVM0011178.1 2 1 7.3 150 0.000254065 gene=EVM0011178
EVM0011426.1 MHONG_EVM0011426.1 2 1 2 306 0.00785634 gene=EVM0011426
EVM0011473.1 MHONG_EVM0011473.1 2 1 1 1212 0.000254065 gene=EVM0011473
EVM0011528.1 MHONG_EVM0011528.1 2 1 1.7 402 0.00114789 gene=EVM0011528
EVM0011601.1 MHONG_EVM0011601.1 2 1 1.6 617 0.000254065 gene=EVM0011601
EVM0011696.1 MHONG_EVM0011696.1 2 1 1.1 548 0.00129414 gene=EVM0011696
EVM0011740.1 MHONG_EVM0011740.1 2 1 3.7 520 0.000254065 gene=EVM0011740
Total protein records: 1669  (+29 contaminants hidden)
Show: proteins per page
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