Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD030136

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts
PRIDE accessionPXD030136
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1669
Peptides (q≤0.01)6436
PSMs (q≤0.01)20078
reprocessed against the CnidoSite reference proteome
29 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0007941.1 MHONG_EVM0007941.1 1 1 11.9 67 0.00114789 gene=EVM0007941
EVM0007989.1 MHONG_EVM0007989.1 1 1 2.5 400 0.000680118 gene=EVM0007989
EVM0007997.1 MHONG_EVM0007997.1 1 1 1.1 1015 0.000254065 gene=EVM0007997
EVM0008034.1 MHONG_EVM0008034.1 1 1 2.4 496 0.000254065 gene=EVM0008034
EVM0008048.1 MHONG_EVM0008048.1 1 1 1.7 526 0.00129414 gene=EVM0008048
EVM0008089.1 MHONG_EVM0008089.1 1 1 3.1 392 0.000254065 gene=EVM0008089
EVM0008134.1 MHONG_EVM0008134.1 1 1 12 83 0.00129414 gene=EVM0008134
EVM0008306.1 MHONG_EVM0008306.1 1 1 8.6 152 0.0019507 gene=EVM0008306
EVM0008335.1 MHONG_EVM0008335.1 1 1 11.3 159 0.00424088 gene=EVM0008335
EVM0008412.1 MHONG_EVM0008412.1 1 1 3.5 432 0.000254065 gene=EVM0008412
EVM0008451.1 MHONG_EVM0008451.1 1 1 2.4 374 0.00114789 gene=EVM0008451
EVM0008463.1 MHONG_EVM0008463.1 1 1 1.5 733 0.000254065 gene=EVM0008463
EVM0008556.1 MHONG_EVM0008556.1 1 1 6.7 209 0.000254065 gene=EVM0008556
EVM0008596.1 MHONG_EVM0008596.1 1 1 6.1 164 0.0019507 gene=EVM0008596
EVM0008599.1 MHONG_EVM0008599.1 1 1 2.4 790 0.000981354 gene=EVM0008599
EVM0008801.1 MHONG_EVM0008801.1 1 1 6.1 264 0.000981354 gene=EVM0008801
EVM0008858.1 MHONG_EVM0008858.1 1 1 3.8 471 0.00129414 gene=EVM0008858
EVM0009087.1 MHONG_EVM0009087.1 1 1 8 199 0.000254065 gene=EVM0009087
EVM0009145.1 MHONG_EVM0009145.1 1 1 9.3 75 0.00881335 gene=EVM0009145
EVM0009158.1 MHONG_EVM0009158.1 1 1 0.6 1410 0.00563287 gene=EVM0009158
EVM0009284.1 MHONG_EVM0009284.1 1 1 3.5 424 0.00129414 gene=EVM0009284
EVM0009302.1 MHONG_EVM0009302.1 1 1 1.3 1026 0.000254065 gene=EVM0009302
EVM0009315.1 MHONG_EVM0009315.1 1 1 8.4 155 0.000981354 gene=EVM0009315
EVM0009420.1 MHONG_EVM0009420.1 1 1 5.1 214 0.000254065 gene=EVM0009420
EVM0009583.1 MHONG_EVM0009583.1 1 1 5.4 313 0.000254065 gene=EVM0009583
Total protein records: 1669  (+29 contaminants hidden)
Show: proteins per page
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