Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD030136

SpeciesMyxobolus honghuensis; Thelohanellus kitauei; Myxobolus wulii
TissueNematocysts
PRIDE accessionPXD030136
Statusreprocessed
Search engineComet 2026.01
Reference proteome/mnt/sda/jackie/cnidaria/2.anno/Myxobolus_honghuensis.pep; /mnt/sda/jackie/cnidaria/2.anno/Thelohanellus_kitauei.pep
Enzymetrypsin
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.02 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins1669
Peptides (q≤0.01)6436
PSMs (q≤0.01)20078
reprocessed against the CnidoSite reference proteome
29 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
EVM0011108.1 MHONG_EVM0011108.1 1 1 1 1010 0.00549085 gene=EVM0011108
EVM0011335.1 MHONG_EVM0011335.1 1 1 9.8 61 0.00798339 gene=EVM0011335
EVM0011452.1 MHONG_EVM0011452.1 1 1 3 264 0.000851426 gene=EVM0011452
EVM0011459.1 MHONG_EVM0011459.1 1 1 7.4 81 0.00592398 gene=EVM0011459
EVM0011476.1 MHONG_EVM0011476.1 1 1 1.9 581 0.00280112 gene=EVM0011476
EVM0011576.1 MHONG_EVM0011576.1 1 1 1.3 777 0.000254065 gene=EVM0011576
EVM0011586.1 MHONG_EVM0011586.1 1 1 2.1 571 0.0019507 gene=EVM0011586
EVM0011625.1 MHONG_EVM0011625.1 1 1 2.9 513 0.000851426 gene=EVM0011625
EVM0011844.1 MHONG_EVM0011844.1 1 1 4.7 384 0.000680118 gene=EVM0011844
EVM0011991.1 MHONG_EVM0011991.1 1 1 1 822 0.00810167 gene=EVM0011991
EVM0012114.1 MHONG_EVM0012114.1 1 1 8.2 158 0.000680118 gene=EVM0012114
EVM0012231.1 MHONG_EVM0012231.1 1 1 4.1 319 0.000851426 gene=EVM0012231
EVM0012276.1 MHONG_EVM0012276.1 1 1 3.9 284 0.000254065 gene=EVM0012276
EVM0012307.1 MHONG_EVM0012307.1 1 1 4.2 353 0.00162279 gene=EVM0012307
EVM0012354.1 MHONG_EVM0012354.1 1 1 1.8 327 0.00810167 gene=EVM0012354
EVM0012414.1 MHONG_EVM0012414.1 1 1 3.1 353 0.000981354 gene=EVM0012414
EVM0012499.1 MHONG_EVM0012499.1 1 1 4.1 318 0.00129414 gene=EVM0012499
EVM0012519.1 MHONG_EVM0012519.1 1 1 2.3 554 0.000254065 gene=EVM0012519
EVM0012629.1 MHONG_EVM0012629.1 1 1 0.8 864 0.00549085 gene=EVM0012629
EVM0012802.1 MHONG_EVM0012802.1 1 1 1 1115 0.000254065 gene=EVM0012802
EVM0012818.1 MHONG_EVM0012818.1 1 1 2 461 0.000254065 gene=EVM0012818
EVM0012942.1 MHONG_EVM0012942.1 1 1 3.2 346 0.000851426 gene=EVM0012942
EVM0012999.1 MHONG_EVM0012999.1 1 1 2.1 529 0.00129414 gene=EVM0012999
EVM0013021.1 MHONG_EVM0013021.1 1 1 1.1 920 0.000851426 gene=EVM0013021
EVM0013162.1 MHONG_EVM0013162.1 1 1 7 185 0.000254065 gene=EVM0013162
Total protein records: 1669  (+29 contaminants hidden)
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