Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| XP_001641015.1 | NVECT_XP_001641015.1 | 13 | 6 | 10.3 | 767 | 0.00104603 | BTB/POZ domain-containing protein 2 [Nematostella vectensis] |
| XP_048582386.1 | NVECT_XP_048582386.1 | 13 | 6 | 4.8 | 541 | 0.00104603 | acid-sensing ion channel 2 isoform X1 [Nematostella vectensis] |
| XP_001624631.2 | NVECT_XP_001624631.2 | 10 | 6 | 24.3 | 136 | 0.00104603 | ATP-dependent RNA helicase DHX33 [Nematostella vectensis] |
| XP_032223456.2 | NVECT_XP_032223456.2 | 9 | 6 | 11 | 544 | 0.00104603 | nucleolin [Nematostella vectensis] |
| XP_001638811.3 | NVECT_XP_001638811.3 | 19 | 5 | 22.8 | 412 | 0.00104603 | uncharacterized protein LOC5518889 [Nematostella vectensis] |
| XP_001622664.3 | NVECT_XP_001622664.3 | 16 | 5 | 32.5 | 157 | 0.00104603 | QRFP-like peptide receptor [Nematostella vectensis] |
| XP_001629765.3 | NVECT_XP_001629765.3 | 11 | 5 | 33 | 115 | 0.00104603 | nudix hydrolase 8 [Nematostella vectensis] |
| XP_001635165.2 | NVECT_XP_001635165.2 | 11 | 5 | 69.9 | 123 | 0.00104603 | RNA-binding region-containing protein 3 [Nematostella vectensis] |
| XP_048582036.1 | NVECT_XP_048582036.1 | 11 | 5 | 3.4 | 528 | 0.00104603 | neurexin-3 [Nematostella vectensis] |
| XP_001627692.3 | NVECT_XP_001627692.3 | 10 | 5 | 59.8 | 112 | 0.00104603 | potassium channel subfamily K member 1 [Nematostella vectensis] |
| XP_001639567.1 | NVECT_XP_001639567.1 | 10 | 5 | 54.9 | 113 | 0.00104603 | somatomedin-B and thrombospondin type-1 domain-containing protein [Nematostella vectensis] |
| XP_001623647.1 | NVECT_XP_001623647.1 | 9 | 5 | 13.5 | 163 | 0.00104603 | transmembrane emp24 domain-containing protein [Nematostella vectensis] |
| XP_001628774.2 | NVECT_XP_001628774.2 | 9 | 5 | 22.1 | 136 | 0.00104603 | ribonuclease P protein subunit p29 [Nematostella vectensis] |
| XP_001638674.1 | NVECT_XP_001638674.1 | 9 | 5 | 40.8 | 120 | 0.00104603 | cytochrome b5 domain-containing protein 1 [Nematostella vectensis] |
| XP_048589004.1 | NVECT_XP_048589004.1 | 9 | 5 | 66.4 | 143 | 0.00104603 | uncharacterized protein LOC5518116 isoform X1 [Nematostella vectensis] |
| XP_048581339.1 | NVECT_XP_048581339.1 | 7 | 5 | 4.5 | 1952 | 0.00104603 | tight junction protein ZO-1 isoform X2 [Nematostella vectensis] |
| XP_032227057.1 | NVECT_XP_032227057.1 | 5 | 5 | 5.6 | 641 | 0.00104603 | solute carrier family 28 member 3 isoform X2 [Nematostella vectensis] |
| XP_048587065.1 | NVECT_XP_048587065.1 | 20 | 4 | 40.5 | 116 | 0.00104603 | mycocerosic acid synthase-like polyketide synthase isoform X2 [Nematostella vectensis] |
| XP_048582067.1 | NVECT_XP_048582067.1 | 13 | 4 | 13.9 | 503 | 0.00104603 | uncharacterized protein LOC5504275 isoform X2 [Nematostella vectensis] |
| XP_001623774.3 | NVECT_XP_001623774.3 | 11 | 4 | 31.6 | 136 | 0.00104603 | ELKS/Rab6-interacting/CAST family member 1 [Nematostella vectensis] |
| XP_001639269.2 | NVECT_XP_001639269.2 | 10 | 4 | 12.9 | 224 | 0.00104603 | deaminated glutathione amidase [Nematostella vectensis] |
| XP_001636066.2 | NVECT_XP_001636066.2 | 9 | 4 | 30.2 | 149 | 0.00104603 | delta(7)-sterol 5(6)-desaturase erg32 [Nematostella vectensis] |
| XP_001636815.2 | NVECT_XP_001636815.2 | 9 | 4 | 49.7 | 157 | 0.00104603 | acylphosphatase-1 [Nematostella vectensis] |
| XP_001642051.1 | NVECT_XP_001642051.1 | 9 | 4 | 44.8 | 145 | 0.00104603 | sulfide:quinone oxidoreductase, mitochondrial [Nematostella vectensis] |
| XP_032220169.2 | NVECT_XP_032220169.2 | 9 | 4 | 4.1 | 1271 | 0.00104603 | uncharacterized protein LOC5519451 [Nematostella vectensis] |
