Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| XP_032239849.2 | NVECT_XP_032239849.2 | 8 | 4 | 1.7 | 2359 | 0.00104603 | spectrin beta chain isoform X2 [Nematostella vectensis] |
| XP_048577263.1 | NVECT_XP_048577263.1 | 8 | 4 | 7.8 | 385 | 0.00104603 | beta-galactosidase 9-like [Nematostella vectensis] |
| XP_001622606.2 | NVECT_XP_001622606.2 | 7 | 4 | 51.2 | 129 | 0.00104603 | chymotrypsinogen B isoform X1 [Nematostella vectensis] |
| XP_001628342.2 | NVECT_XP_001628342.2 | 7 | 4 | 17 | 306 | 0.00104603 | peroxisomal acyl-coenzyme A oxidase 1 [Nematostella vectensis] |
| XP_048584637.1 | NVECT_XP_048584637.1 | 7 | 4 | 6.7 | 1320 | 0.00104603 | uncharacterized protein LOC116603437 isoform X1 [Nematostella vectensis] |
| XP_048587522.1 | NVECT_XP_048587522.1 | 7 | 4 | 1.3 | 972 | 0.00275482 | uncharacterized protein LOC125570224 [Nematostella vectensis] |
| XP_001623802.3 | NVECT_XP_001623802.3 | 6 | 4 | 30.2 | 116 | 0.00104603 | octopamine receptor [Nematostella vectensis] |
| XP_001632744.2 | NVECT_XP_001632744.2 | 6 | 4 | 3.3 | 1067 | 0.00104603 | tektin-1 [Nematostella vectensis] |
| XP_001640335.2 | NVECT_XP_001640335.2 | 6 | 4 | 58.2 | 98 | 0.00104603 | kelch-like protein 17 [Nematostella vectensis] |
| XP_032237452.1 | NVECT_XP_032237452.1 | 6 | 4 | 12.4 | 427 | 0.00193986 | zinc metalloproteinase nas-4 isoform X2 [Nematostella vectensis] |
| XP_048579808.1 | NVECT_XP_048579808.1 | 6 | 4 | 8.9 | 347 | 0.00104603 | LWamide neuropeptides [Nematostella vectensis] |
| XP_001641557.3 | NVECT_XP_001641557.3 | 5 | 4 | 21.9 | 274 | 0.00193986 | angiopoietin-related protein 7 isoform X2 [Nematostella vectensis] |
| XP_001636034.3 | NVECT_XP_001636034.3 | 4 | 4 | 22.8 | 8299 | 0.00104603 | nucleolar complex protein 4 homolog B-like [Nematostella vectensis] |
| XP_001640877.2 | NVECT_XP_001640877.2 | 4 | 4 | 48.1 | 77 | 0.00104603 | cytochrome c oxidase assembly protein COX15 homolog [Nematostella vectensis] |
| XP_048586501.1 | NVECT_XP_048586501.1 | 4 | 4 | 1.2 | 4189 | 0.00104603 | nuclear pore complex protein Nup133 [Nematostella vectensis] |
| XP_001618536.3 | NVECT_XP_001618536.3 | 10 | 3 | 44.7 | 123 | 0.00104603 | uncharacterized protein LOC5496843 [Nematostella vectensis] |
| XP_032229207.2 | NVECT_XP_032229207.2 | 9 | 3 | 12 | 217 | 0.00104603 | uncharacterized protein LOC116612535 [Nematostella vectensis] |
| XP_048578222.1 | NVECT_XP_048578222.1 | 9 | 3 | 14.5 | 117 | 0.00104603 | uncharacterized protein LOC116612381 isoform X2 [Nematostella vectensis] |
| XP_001629483.3 | NVECT_XP_001629483.3 | 8 | 3 | 7.8 | 565 | 0.00104603 | uncharacterized protein LOC5508938 [Nematostella vectensis] |
| XP_032226345.1 | NVECT_XP_032226345.1 | 8 | 3 | 26.4 | 159 | 0.00104603 | uncharacterized protein LOC5502177 isoform X1 [Nematostella vectensis] |
| XP_032233211.1 | NVECT_XP_032233211.1 | 8 | 3 | 47.3 | 294 | 0.00104603 | uncharacterized protein LOC116615588 [Nematostella vectensis] |
| XP_048587922.1 | NVECT_XP_048587922.1 | 8 | 3 | 20 | 140 | 0.00104603 | DNA polymerase epsilon catalytic subunit A isoform X1 [Nematostella vectensis] |
| XP_048588533.1 | NVECT_XP_048588533.1 | 7 | 3 | 9.6 | 520 | 0.00104603 | protein sax-3 isoform X2 [Nematostella vectensis] |
| XP_001630817.1 | NVECT_XP_001630817.1 | 6 | 3 | 29.1 | 103 | 0.00104603 | uncharacterized protein LOC5510333 [Nematostella vectensis] |
| XP_001637699.2 | NVECT_XP_001637699.2 | 6 | 3 | 19.7 | 228 | 0.00104603 | protein BTN1 [Nematostella vectensis] |
