Proteomic Analysis

Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.

Dataset
Contaminants

Dataset provenance & search parameters — PXD045585

SpeciesExaiptasia diaphana
TissueSymbiont Breviolum minutum
PRIDE accessionPXD045585
Statusreprocessed
Search engineComet 2026.01
Reference proteomeCnidoSite reference proteome
Enzymetrypsin/P
Missed cleavages2
Precursor tolerance10 ppm
Fragment tolerance0.5 Da
Fixed modificationC+57.021464
Variable modificationM+15.9949
Decoy strategyComet internal reversed (1:1)
FDR (PSM)0.01
Quantificationspectral counting (PSMs)
Proteins3451
Peptides (q≤0.01)14806
PSMs (q≤0.01)377023
reprocessed against the CnidoSite reference proteome
20 cRAP contaminant protein s (keratins, trypsin, serum albumin …) were identified in this dataset and are excluded from the table below. Tick “include cRAP contaminants” to display them.
Gene Protein PSMs Unique peptides Coverage (%) Length Best q-value Description
KXJ26288.1 EDIAP_KXJ26288.1 359 13 52.7 315 0.000121477 hypothetical protein AC249_AIPGENE303 [Exaiptasia diaphana]
KXJ13546.1 EDIAP_KXJ13546.1 355 13 30.9 521 0.000121477 Zinc metalloproteinase nas-14 [Exaiptasia diaphana]
KXJ30180.1 EDIAP_KXJ30180.1 347 13 34.6 289 0.000121477 Synaptoporin [Exaiptasia diaphana]
KXJ11107.1 EDIAP_KXJ11107.1 335 13 28.2 567 0.000121477 hypothetical protein AC249_AIPGENE14046 [Exaiptasia diaphana]
KXJ26382.1 EDIAP_KXJ26382.1 334 13 34.9 524 0.000121477 hypothetical protein AC249_AIPGENE11632 [Exaiptasia diaphana]
KXJ18568.1 EDIAP_KXJ18568.1 324 13 20.4 741 0.000121477 WD repeat-containing protein 37 [Exaiptasia diaphana]
KXJ17140.1 EDIAP_KXJ17140.1 307 13 25.2 650 0.000121477 hypothetical protein AC249_AIPGENE8130 [Exaiptasia diaphana]
KXJ20483.1 EDIAP_KXJ20483.1 283 13 30.3 581 0.000121477 Nitrogen permease regulator 3-like protein [Exaiptasia diaphana]
KXJ09443.1 EDIAP_KXJ09443.1 244 13 29.6 652 0.000121477 Neuronal acetylcholine receptor subunit alpha-10 [Exaiptasia diaphana]
KXJ07642.1 EDIAP_KXJ07642.1 210 13 15.3 1322 0.000121477 SUMO-specific isopeptidase USPL1 [Exaiptasia diaphana]
KXJ18627.1 EDIAP_KXJ18627.1 138 13 4.3 5076 0.000121477 Leucine-rich repeat-containing protein 74A [Exaiptasia diaphana]
KXJ20125.1 EDIAP_KXJ20125.1 136 13 13.5 1271 0.000121477 Uncharacterized protein K02A2.6 [Exaiptasia diaphana]
KXJ21248.1 EDIAP_KXJ21248.1 92 13 8.8 2386 0.000121477 General transcription factor IIE subunit 1 [Exaiptasia diaphana]
KXJ15298.1 EDIAP_KXJ15298.1 1073 12 8.9 1567 0.000121477 UPF0317 protein C14orf159-like, mitochondrial [Exaiptasia diaphana]
KXJ29841.1 EDIAP_KXJ29841.1 726 12 7.2 1803 0.000121477 Alpha-(1,6)-fucosyltransferase [Exaiptasia diaphana]
KXJ12410.1 EDIAP_KXJ12410.1 663 12 46.7 244 0.000121477 Polycystic kidney disease protein 1-like 3 [Exaiptasia diaphana]
KXJ28299.1 EDIAP_KXJ28299.1 602 12 68.6 172 0.000121477 Carbonyl reductase [NADPH] 1 [Exaiptasia diaphana]
KXJ14422.1 EDIAP_KXJ14422.1 563 12 43.4 267 0.000121477 T-complex protein 1 subunit eta [Exaiptasia diaphana]
KXJ07022.1 EDIAP_KXJ07022.1 553 12 30.6 359 0.000121477 Ras-related protein Rab-13 [Exaiptasia diaphana]
KXJ28017.1 EDIAP_KXJ28017.1 516 12 32 334 0.000121477 Heat shock cognate 71 kDa protein [Exaiptasia diaphana]
KXJ08670.1 EDIAP_KXJ08670.1 489 12 39.5 367 0.000121477 hypothetical protein AC249_AIPGENE4960 [Exaiptasia diaphana]
KXJ16087.1 EDIAP_KXJ16087.1 473 12 16.3 1351 0.000121477 Non-specific lipid-transfer protein [Exaiptasia diaphana]
KXJ18632.1 EDIAP_KXJ18632.1 425 12 34.3 324 0.000121477 hypothetical protein AC249_AIPGENE3799 [Exaiptasia diaphana]
KXJ08574.1 EDIAP_KXJ08574.1 418 12 13.9 907 0.000121477 Tetratricopeptide repeat protein 28 [Exaiptasia diaphana]
KXJ12505.1 EDIAP_KXJ12505.1 384 12 40.4 312 0.000121477 Roundabout-like 1 [Exaiptasia diaphana]
Total protein records: 3451  (+20 contaminants hidden)
Show: proteins per page
« First ‹ Previous 1 5 6 7 8 9 10 11 139 Next › Last » of 139 pages
TOP